Paralichthys olivaceus (Japanese flounder): 109641847
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Entry
109641847 CDS
T06037
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109641847
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109641847
09142 Cell motility
04820 Cytoskeleton in muscle cells
109641847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pov00535
]
109641847
Proteoglycans [BR:
pov00535
]
Extracellular matrix (ECM) proteoglycans
Others
109641847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109641847
NCBI-ProteinID:
XP_019961975
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAPSRICRASLLVILLQIVLICSAQRGPVGPRGPAGPPGAAGVPGVDGIDGDRGEDSTVN
GGPGPDGDNGKDGAAGAGGLPGADGPVGPPGDPGPVGTKGPKGDAGARGPPGEPGVGPDG
LDGIPGTDGLPGELGKVGAPGARGKRGQVGLPGAAGPRGPPGVYQGEDLCPNACPSGLNG
HSGLPGMKGHKGVKGESGEPGRQGHKGEEGDQGLQGEVGAQGLPGPGGKRGLPGIMGSKG
DRGPRGNFGGVGPQGIQGAPGDPGQRGAIGETGPRGVSGDRGPQGIRGVPGPKGEPGLPG
PDGREGIPGLPGSKGLPGKNGALGDGGLQGLPGLPGAYGQKGHAGGKGNTGDPGVAGLMG
SPGKQGERGEQGEMGPVGPRAGPGERGERGPEGPLGSPGARGGKGDPGLPGLPGPAGYRG
QQGDRGAVGLDGPKGEQGPAGSEGTPGDRGDLGEQGEAGEKGSTGPPGETGNKGPEGGRG
QPGKEGKSGQSGPRGMQGDMGVPGLPGSQGPAGKSPTDTHIKQVCMRVMQEQLAQLAASL
RRPESGISGLPGPPGPPGPPGPSGENGFPGHTGSRGLPGLKGPSGVMGRKGPKGDHGDQG
ERGPTARGPKGAPGAPGLSGEPGRPAYGKDGRDGERGPRGAPGIPGVPGPPGTAGLNGYC
ESSQCILPMVASPVSAKDSSMKGPNEM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtccaggatctgtcgggcgtctttactggtgattttactacaaatcgtcttg
atctgctcggctcagaggggcccggtgggtcccagaggccccgcaggcccgcccggagca
gccggcgtgcccggagtggacggcatcgatggcgacagaggagaagactccacggtgaac
ggtggaccaggtcctgacggcgataacggcaaagacggagctgctggagctggaggcctc
ccgggcgcagacggacccgtgggacctcctggagatccaggtccagtcggcacaaaggga
ccgaagggggatgctggagcacgagggcctcctggagagcctggtgtcggacccgacgga
ctcgatggtattcctggtacagacgggctgccgggggaattgggtaaagttggtgccccg
ggggcgagagggaagagaggtcaagtcggacttcctggtgccgccgggcctcggggacct
ccgggtgtttatcaaggagaagacctgtgtcctaacgcctgtccctctggtctcaatgga
cactctggtctccccggcatgaaaggacacaaaggggtcaaaggtgaatctggcgagcct
ggaagacaaggacacaagggggaggagggagatcaaggcctgcagggagaagtcggagct
cagggactaccgggcccaggtggaaaaagaggcctcccgggaataatgggctccaaaggg
gacaggggacctcgtggaaattttggtggtgtgggtcctcaggggatccagggagctcca
ggagatccgggccagagaggagccataggagagactggaccgaggggagtgtcgggggat
cgaggaccacaaggaatcagaggagtgccgggtcctaaaggagaacctggtttacccggg
cccgatggtcgcgagggaatacccgggctgccaggatccaagggtcttccagggaagaat
ggggctctaggtgacggcggcctacagggacttcctggtttgccaggcgcttatggccag
aaaggacacgctggcgggaagggcaacacaggtgatccaggagttgcaggactgatgggg
tctccggggaaacagggcgagcgtggcgagcagggagagatgggaccggttggacccaga
gcaggaccaggtgaacgaggagaacgagggcctgaagggcctctaggatcaccaggagcc
cggggaggcaaaggggacccgggtcttccaggacttcctggacctgctggttatcgtggt
cagcaaggagacaggggtgcagtcggtctggacggacctaaaggagagcagggaccagcg
ggttctgaggggacgccgggagacagaggagacctgggagaacaaggagaagcaggagag
aaaggatcgactggcccaccaggagagacaggaaataaaggacctgagggtggccgagga
cagccagggaaagagggcaagtcgggccagtcgggaccgcggggaatgcagggcgacatg
ggagtaccaggcctccccggatcacagggaccagcgggaaaatctccgacagatacacac
atcaaacaagtttgcatgagggtaatgcaagagcagctggcccagctagcagccagcctg
agaaggcctgagtcaggaatctctgggctgcctggtccccccggcccgcctgggcccccg
ggaccctctggggagaacggtttccccggacacaccggatcacgagggctgccggggctg
aagggtccatctggggtaatgggtcgcaaaggacccaaaggtgaccatggtgaccaaggc
gaacgaggacccacagcgagaggacccaaaggagcacccggagcgccgggtctatcaggt
gaaccgggtcgaccggcttacggcaaagacgggcgtgatggagagcgggggcctcggggc
gctcccggtattcctggcgtgcccgggcctcccggtaccgcaggtctgaacggttactgc
gagtcgtcgcagtgcatcctaccgatggtggcgtcaccggtttccgcaaaggactccagc
atgaagggccccaacgagatgtga
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