Paralichthys olivaceus (Japanese flounder): 109642031
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Entry
109642031 CDS
T06037
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109642031 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109642031 (nup160)
03036 Chromosome and associated proteins [BR:
pov03036
]
109642031 (nup160)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109642031 (nup160)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109642031 (nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_2
TPR_1
DUF2252
Motif
Other DBs
NCBI-GeneID:
109642031
NCBI-ProteinID:
XP_019962225
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
VTAPAGGQKFADSAGAFHYEESGKLLSVTSNRFIHWLTSGDSVQLVEQSLDANLLNNTVK
LRFTHCNVLPGGVTIQETLSNVIILISTNQSVHRLVLPHPTCMYRSELVTELHMQSVLTD
VGKLSLQDPSHSATIPSSVVQTGSPSSCTAWLSHQGEAHYALASSAGGIVVVTLPPHDTP
GGVSTVELKRSSVMRRLSGWMPTVMRGDSRTEHVVSLIVRELEDDSFIFTLSQDHRLRMW
SLTEQACLLEVDVLEYMPACKGVQRVSAQGHRLRMTFSSTTGLCLCVYLAIPQRGQFTVL
QLVTADNNRYSLEHISTLFTTQETLVDFHLTSTDVWGLWVDESNATVIKYINFEHNSAGQ
WNQVFVQPSPEEEVHVGVDQDPRETYLDVLFSPLRFSAAAVVKALQIFRRGSERISDVSW
ETLKKEVTVAVETELQNSVTEFEFSQEEYRQLQVEFWSKFYACCLQYQESLSTPFALTVS
HSTGLVCLLKKGSVSFLLPCFAVDHLYLSSDEYLFSEEETPVTEDQEVGRDILQLVQCLR
LLSDAVSGEMAYEMEKALDHLQSPGRASEVVMETMLSNDSDNVIEDIQNKLQDVRNPTAA
MMVLLREMDLETDSDVTGEGAITPGQGLNVRISLSQLYGSSAAISLVCQAVSHMAMTRAL
FCRDLLILQKLYLRLGDNVFLGGGAQLLQLQQDLIPRTCHLLSSYHLLKHMSQSVALSVP
VDIIDANLQHLTVLELSDCPTPSNRTVLSPQTVVELFYQTAARRIIMSQIFAQQQSHALL
VWSHMISNVVALLAQLLWPSNPGFQFPECLMSNCQYTQLQEYVRLIGPWCQVNIGSCRFM
LGQCYLANGEGQKALQCFQEAATEVEKEEFLMRLTGTEDEEAAATCRLQYYNKVLRLLED
VGLPELVIQLASLALTEAVGDVSTQAALWTRIFKHHLDLGHNSEAYEXXXXXXXXXRQLD
CLRQLVVVLCERSQLQDLVQFSYVNLHDEVVSIIESRARGLDLLTHNYYELLYAFHINRH
NYRKAGTVMFELAMRLGREVPTRLGLQKQVNCYLSALNCLRLIRPEYAWIVTPASGAVYE
RAGASPKRNSDGDFSCEPVKRQVDILELNDLEKEYFLSRCRLTLAQHHPPSATIAGSASA
EEMVSLLVQSGLFDSALCLCQTFKLTLTPVFEGLAFKCVRLQFGGEETQNEAWSWLADNQ
LSTVVNTKESSAADEAWRLLASYLDRYPSANGQHHRSVINKLLSHGAPLPDWLVKSYKAV
DAASLLRLYLNFDLLEAAAELVLENVDALLGRGHQYFGIEKPLSATFSSVWLPYTSIDQL
MQALADTQTNSSIYNKVRDKLDEYHKLVDQTTRRRLVAR
NT seq
4082 nt
NT seq
+upstream
nt +downstream
nt
gtgtgactgctcccgctggtggccagaagtttgcagacagtgctggagcatttcattatg
aggagagtgggaagctgctgtcagtcaccagtaacagattcatccactggttgacgtctg
gtgactcggtgcagctggtggaacagtctctggacgccaacttgctcaacaacacagtca
aactccgtttcacccactgcaatgttttgcccgggggggtcaccatccaggagacgctca
gcaacgtcatcatcctcatctccaccaatcagagtgtccacagactggtgctgcctcacc
ccacatgcatgtaccgcagtgagctggtgacggagctccacatgcagtccgtcctcactg
atgtggggaagctgagtctgcaggacccatcgcacagtgctaccatccccagctcagtgg
tacagactgggagtcccagctcctgcacagcctggctgagtcaccagggggaggcgcatt
acgccctagcttcatctgcagggggtatcgtggtggtcactctgcccccccatgacacac
caggtggcgtgtcgacggttgagctgaagagaagctcggtgatgcggaggttgtcgggtt
ggatgccaacagtgatgagaggagacagtagaactgaacacgtggtcagtctgatcgtca
gagaactggaggacgactcattcatcttcacactaagtcaagatcatagactgaggatgt
ggtcgctcacggagcaggcatgtctgctggaggtggacgtgttggagtacatgcctgcgt
gtaaaggagttcagcgtgtgtctgctcagggtcatcgtctgaggatgaccttctcttcca
ccaccggcctctgtctctgcgtttacctggccatccctcagcgaggacagttcaccgtcc
tgcagttggtcactgccgacaacaaccgctacagcctggaacacatctccaccctgttca
ccacgcaggaaactctggtggattttcatctgacatctacagatgtgtggggactgtggg
tggacgagtccaacgccactgtcattaagtacattaactttgaacataactcagcaggtc
agtggaaccaggtgtttgttcagccttcaccagaggaagaagttcatgtaggagtcgacc
aggaccctagagagacgtacctggacgttctcttctcccctctcagattttcggctgcgg
ccgtagttaaagctctgcagatcttccgtcgtggctcagagagaatctctgacgtttcct
gggagacgctgaagaaggaagtgacagttgctgtggagacggagcttcagaacagtgtga
cagagtttgagttctctcaggaggaataccgtcagctgcaggttgagttctggtcaaagt
tctacgcatgttgtcttcagtaccaagagtctctgtccaccccgtttgctcttaccgtga
gtcacagcaccggactggtgtgtctgctcaagaagggttccgtttccttcctgcttcctt
gttttgcggtggatcatttgtatctgagcagcgacgagtatctgttctctgaggaggaga
cgcctgtcactgaagaccaggaagtgggccgggacatcctgcagctcgtccagtgtctgc
ggctgctcagtgatgctgtttctggagagatggcatatgagatggagaaagctctggatc
atcttcagtcacctggacgagcttctgaggtcgtcatggagacaatgctgtccaatgaca
gcgataatgtgatagaggacattcagaacaaactgcaggatgtccgtaacccgactgcgg
ccatgatggtcctactgagggaaatggacctggagacggactcagatgtcacaggtgaag
gagccatcacacctggtcagggtctgaacgtcaggatcagcctgtcacagctgtacggca
gcagtgccgccatttctctcgtctgtcaggctgtcagtcacatggccatgaccagagcgc
tgttctgcagagacctgctgatcctgcagaaactctatctgaggctgggagacaacgtgt
ttctgggtgggggggctcagctgctgcagcttcagcaggacctgattcctcggacttgtc
acctcctgtcgtcttatcacctccttaaacacatgagtcagagcgttgccttgtccgtcc
ctgtggacatcatagacgccaacctgcagcacctcacagtgttagaactgtctgactgtc
caactccatccaacagaacagtactcagtcctcagactgtggtggagctcttctatcaga
cggcggcgaggaggatcatcatgtctcagatctttgctcagcagcagagtcatgctctgc
ttgtctggagccacatgatctctaacgtggtcgctctgctcgctcagctgctttggccca
gtaaccctggtttccagtttcctgaatgtctgatgtcaaactgtcagtacacacagctgc
aggagtacgtgaggctgattggtccgtggtgtcaggtgaacattggctcgtgtcgcttca
tgttgggtcaatgttacctggctaatggcgagggacaaaaggcgctgcagtgtttccagg
aggcagctacagaggtggagaaggaggagtttctaatgcgactgacaggcactgaggatg
aagaagctgcagcgacctgcaggttacagtactacaacaaggtgctgcgcttactggagg
atgtgggtttacctgagctggtcatccagttagcgtctttggccttaacagaggccgttg
gtgatgtcagcactcaggctgctctgtggactcggatctttaaacatcatctggacctcg
gacacaacagtgaagcttatgaannnnnnnnnnnnnnnnnnnnnnnnntcaggcagctgg
attgcctccgtcagctggtggtggttctgtgtgaacgctctcagctccaggatttagtcc
aattctcctacgtcaacctgcacgatgaggtcgtcagtatcatcgagtctcgtgccagag
gtctggacctgctgactcataactactacgagctgctgtatgccttccacatcaacagac
acaactacaggaaagcggggactgtcatgtttgagttggcgatgcgtcttggacgcgagg
ttccgactcgtcttggtcttcagaaacaggtgaactgttacctgtctgctctcaactgtc
tccgcctcatcagaccagagtatgcctggatcgtcacacctgcgtctggagctgtgtacg
agcgtgcaggagcgtctccaaagagaaactctgatggagatttttcatgtgaaccagtta
aacgtcaggttgacattctggaactcaacgacttggagaaggagtacttcctgtctcgct
gccgcctgacgctagcccagcaccacccaccatctgccaccattgcaggaagtgcgtcag
cggaggagatggtgtccctgttggttcagtctggactctttgactcggctctgtgtctct
gtcagacgttcaaactgaccttgactccggtgtttgagggtttagcctttaagtgcgtca
ggcttcagtttgggggggaggagactcagaatgaagcttggagctggttggctgataatc
agctgtcgactgtcgtcaacaccaaagagtccagtgctgcagatgaggcgtggcggctac
tggcctcttacctggacaggtatccctccgctaacggacagcaccaccgcagtgtcatca
acaagctgctgtcacatggtgcccctctacctgattggctggttaagtcatacaaggctg
tggatgcagcatcactgttgcgtctctacctgaactttgaccttctggaagctgcagctg
aacttgtcctggagaatgtggacgctctgctgggaagaggacatcagtactttggaatag
aaaagcctctgtctgcgaccttctcttcagtttggcttccgtacacgtcgatcgatcagc
tgatgcaggcacttgctgacactcaaaccaacagcagcatctataacaaagttcgagaca
aactggatgagtatcacaaattggtggatcagacgaccagacgcagactcgtcgctcgat
aa
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