Pandoraea oxalativorans: MB84_03070
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Entry
MB84_03070 CDS
T03840
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pox
Pandoraea oxalativorans
Pathway
pox03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MB84_03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pox03021
]
MB84_03070
03400 DNA repair and recombination proteins [BR:
pox03400
]
MB84_03070
Enzymes [BR:
pox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MB84_03070
Transcription machinery [BR:
pox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MB84_03070
DNA repair and recombination proteins [BR:
pox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MB84_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DNAPolymera_Pol
RnfC_N
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
AKC68663
UniProt:
A0A0E3U5K0
LinkDB
All DBs
Position
complement(5262710..5266816)
Genome browser
AA seq
1368 aa
AA seq
DB search
MHYSFTEKKRIRKSFAKRPTVHKVPFLLATQLASYTSFLQADALASERKPEGLQAAFSSI
FPIVSHNGFARLEFVSYLLGTPAFDVKECQQRGLTFCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFKLMPE
GAQMEFVPERLRGEVARFDITDREGKVIVQKDKRVNAKHIRDLENANTKFISVPEDYLLG
RVLAKNVIDGDTGEVIANANDEITESVLLKLRESGVSDIQTLYTNDLDQGSYISATLRID
ETADQTAARIAIYRMMRPGEPPTEDAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEV
LGPMTLEDDDILATIKILVDLRNGRGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKV
EDGKVTDQIDYLSAIEEGRYVIAQANASIGANGELTDELVSSREAGETLMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKAVVGTGIERTVAVDSGT
TVQAFRGGVVDYVDAGRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVEVG
DKVARGDVIADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLSRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
GYRLDLNDQLRIVEGDAFQRLERFLVGKTANGGPKKLAKGTKITKEYLADLDRYHWFDIR
LAEDEGAQQLEQIKESIEQKRHSFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADIVLNPLGVPSRMNVGQILESHLGWAA
KGLGWRIGEMLQAHTKVQELRKFLTKIYNESGQQEDIDSLSDDEIMSLARNLQNGVPFAT
PVFDGAHEEEIRRMLDLAFPDHIAKELGMTPSKNQVTLFDGRTGEAFERTVTCGFMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLERG
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcactattccttcaccgagaagaaacgcattcgcaagagttttgcgaagcgtccgacc
gtgcacaaggtgccgtttttgctggccacccagctcgcctcgtacacatcgttcttgcaa
gccgatgcgcttgcatcggagcggaagccggagggtctgcaagcagccttctcctccatt
ttcccgatcgtttctcacaacgggttcgcacgcctggaatttgtcagctatttgcttggc
acgcctgcgttcgatgtcaaggaatgtcaacagcgcggcctgaccttctgctcggccctg
cgcgccaaggttcgtctggtgattctcgataaggaatcgccgaacaagccggtagtcaag
gaagtaaaggaacaggaagtgtacatgggcgaaattccgctcatgacctcgacgggttcc
ttcgtcatcaatggcacggaacgtgtcatcgtctcgcagctgcaccgttcgccgggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaaactgctgttctccgcgcgt
atcatcccctaccgcggctcgtggctcgacttcgaattcgatccgaaggacattctgtac
ttccgcgttgaccgccgtcgcaagatgccggtcacgatcctgctcaaggccatcggcctg
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcaagctgatgccggaa
ggcgcgcagatggagttcgtgccggagcgtctgcgtggtgaagtggctcgcttcgacatc
acggatcgcgaaggcaaggtcattgtccagaaggataagcgcgtcaacgccaagcacatc
cgcgacctcgagaacgccaacaccaagttcatctcggtgccggaagactatctcctcggc
cgtgtgctcgcgaagaacgtgatcgatggcgacaccggcgaagtgatcgccaacgccaac
gacgaaatcaccgaaagcgtgctgctcaagctgcgcgagtcgggcgtgtcggacatccag
acgctgtacacgaacgatctggatcagggttcgtacatctcggccacgctgcgtatcgac
gaaaccgccgaccagacggccgcgcgtatcgcgatttaccgcatgatgcgcccgggcgag
ccgccgaccgaagatgcagtcgaggccctgttcaaccgcctgttctacagcgaagaagct
tacgacctgtcgaaggtgggtcgtatgaagttcaaccgtcgtgttggccgtgacgaagtg
ctcggaccgatgacgctggaagacgacgacattctcgcgaccatcaagatcctcgtggat
ctgcgtaacggccgcggcgaagtcgacgacatcgaccacctgggtaaccgtcgtgtgcgt
tgcgtcggcgaactggcggagaaccagttccgcgccggtctggtgcgtgtcgagcgtgct
gtgaaggaacgtctgggtcaggccgagtcggaaaacctgatgccgcacgacctgatcaac
agcaagccgatttcgtcggccattcgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgtcgtgtttccgcactgggc
ccgggcggtctgacgcgcgagcgtgcaggctttgaagtccgcgacgtgcacccgacccac
tatggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctgatcaactcg
ctggcactgtacgcccgcctgaacgaatacggcttcctcgagacgccgtaccgcaaggtg
gaagacggcaaggtcaccgaccagatcgactatctgtcggccattgaagaaggtcgttac
gtgatcgctcaggcgaacgcgtcgatcggcgccaacggcgaactcaccgacgaactcgtg
tcgtcgcgtgaagccggtgaaacgctgatggtcacgccggaccgcatccagtacatggac
gtggccccgtcgcagatcgtctcggtcgcagcctcgctgattccgttcctcgaacacgat
gacgcgaaccgcgcattgatgggttcgaacatgcagcgccaggccgtgccttgcctgcgt
ccggaaaaggcggttgtcgggacgggtatcgaacgtacggtggcggttgactcgggtacg
accgtgcaggcgttccgtggcggtgtggtcgactacgtcgatgcaggccgtgtggtgatt
cgcgtgaacgacgacgaagccgttgccggtgaagtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacaccaacatcaaccagcgcccgatcgtggaagtgggc
gataaggttgcgcgcggcgatgtgatcgccgacggcgcgtcgaccgacctgggtgagctg
gcgctgggtcagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaagac
tcgatcctgatctcggaacgtgtcgttgcggaagaccgttacacgtcgatccacatcgaa
gaactgaacgttgtcgctcgcgacacgaagctcggaccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtgcaactgagccgtctggacgagtcgggcatcgtgtacatcggt
gcggaagtcgaagccggcgacgtgctggtgggcaaggtcacgccgaagggcgaaacccag
ctcacgccggaagaaaagctgctgcgcgcgatcttcggcgagaaggcttcggacgtgaag
gacacctcgctgcgcgtgccgtcgggcatgagcggcaccgtcatcgacgtgcaggtgttc
acgcgtgaaggcattcagcgcgacaagcgcgctcagcagatcatcgacgatgaactgaag
ggctaccgcctcgacctgaacgaccagctgcgtatcgtggaaggcgacgcattccagcgt
ctggagcgtttcctggtgggcaagacggccaatggcggcccgaagaagctcgccaagggc
accaagatcaccaaggaatacctggccgatctggaccgctaccactggttcgacatccgt
ctggcggaagacgaaggtgcgcaacagctcgaacagatcaaggaatcgatcgagcagaag
cgtcactcgttcgacctggctttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctggcggtcaagcgtcgtctgcag
cctggcgacaagatggccggtcgtcacggtaacaagggtgtggtctcgaagatcgtgccg
atcgaggatatgccgtacatggccgatggccgtccggcagacatcgtgctcaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcagattctcgaatcgcacctcggctgggcggcg
aagggtctgggctggcgtatcggcgaaatgctgcaagcgcacacgaaggtccaggagctt
cgcaagttcctgacgaagatctacaacgagagcggtcagcaagaagatatcgacagcctg
tcggacgacgaaatcatgtcgctcgctcgcaacctgcagaacggtgttccgttcgcgacg
ccggtgttcgatggcgcgcatgaagaggaaatccgtcgcatgctggatctggctttcccg
gatcacatcgcgaaggaactcggcatgaccccgtcgaagaaccaggtcacgctgttcgac
ggtcgcactggcgaagccttcgagcgtacggtcacttgcggcttcatgcacatgctcaag
ctgcaccacttggtcgacgacaagatgcacgcacgttcgaccggtccgtactcgctggtg
acgcaacagccgttgggcggtaaggctcagttcggtggtcagcgcttcggtgaaatggaa
gtgtgggcactggaagcttacggcgcatcgtatgtgctgcaggaaatgctgacggtgaag
tcggatgacgtgacgggtcgtacgaaggtgtacgagaacctcgtcaagggcgatcacgtg
atcgatgccggcatgccggagtcgttcaacgtgctggtcaaggaaatccgttcgctcggt
atcgatatcgacctggagcgcggttaa
DBGET
integrated database retrieval system
