Komagataella phaffii: PAS_chr3_0219
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Entry
PAS_chr3_0219 CDS
T01092
Name
(RefSeq) DNA helicase and DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03420
Nucleotide excision repair
ppa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAS_chr3_0219
03430 Mismatch repair
PAS_chr3_0219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr3_0219
Enzymes [BR:
ppa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAS_chr3_0219
DNA repair and recombination proteins [BR:
ppa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAS_chr3_0219
MMR (mismatch excision repair)
Other MMR factors
PAS_chr3_0219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
Helicase_RecD
Exo70_N
Motif
Other DBs
NCBI-GeneID:
8199968
NCBI-ProteinID:
XP_002492429
UniProt:
C4R3W4
LinkDB
All DBs
Position
3:437955..440363
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AA seq
802 aa
AA seq
DB search
MLASLNSQQYEAVTADIHKPLQIIAGPGTGKTKVLTSRVAYLLIEHKIPPSNIIVTTFTK
KAANEMVERLQVLFAKENLDPDKYLKGLLIGTFHSICVKLLRRYGTQIGLTPKFKIADER
DSNTILSKILTTLSDDVVRLKFHPSSVSVDIYQKDPKETDKLHGYDLKKAKSQISKLKSL
TTTPQTYSTTSARSFDLAVIYSLYQESLRKHNLIDFDDCLLYTYLLLSETRKKGRVLLKE
LKHVLVDEFQDTNKIQMELLYLLGQCTDDQNFEDNVTVVGDSDQSIYMFRNAVASNFENM
IIHYQNCQEITLKENYRSTSNILNFSEQIMTQQKDRKQKSLRSQISHLNIPIVYVRTQNT
FKEADHIASEVAKLGLMSGLLTSYNDIAILLRSSFQSRVIEQSLVTNRIPYEVVHGRAFW
ELKEIRVAMDYLRAIVNNSDNLAILRTLNFPPRGVGNKTLQRLEELIDKSDCPVIETLEM
AIHDKKNGFLNVKSESGVRQYIDILKECGRLLDSTSLDCEASLEACFDQIVQLANLKEIK
KTPETSKGTHDSENALKAVEENLNEFKRQLIEYKPIIDQIITAEAGDTPLTTRDVLSSFL
DSIDLYETSNNENKKDSKKGRVTISTIHGAKGLEWPVVFIPGCTDGVIPSKWTLEDDGPD
SSTNLDEDRRCFYVALTRAKSMLYLSSYKERSTPWSGEESNEVSCFLKPTLKMFQNQLVT
SISNMSKNSWRDLYEAMGKEYKPVSNILTESNRSRNHIVSTKDFLKNKQFKSPLLTKSTT
APSYVPDRSNNKKRRLGVRRRI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcatcattaaactctcagcagtatgaggcagtgactgcagatattcataagcca
ttgcaaataattgctggacctggaactgggaagaccaaagttttgacctcacgcgtagct
tatcttttgatagagcacaagatccctccttcgaatattattgtcacaacctttacaaag
aaggcagccaacgagatggtagaaagactgcaggttctatttgcaaaagagaaccttgat
cccgacaaatatctaaaaggtctcttgataggcacttttcattcaatttgtgtcaagtta
ttgagaagatatggaacccaaattgggttgactcccaagtttaaaatagccgatgaacgg
gattctaacactattttaagcaaaattttgaccaccttgtcagatgatgttgttagatta
aaatttcatccatcttctgtttcagttgacatctatcaaaaggatcccaaagagactgat
aaattgcatggatatgatctgaaaaaggcaaaatcgcagatctccaaacttaaatcgttg
actaccacgccgcagacatatagtactacttctgcaagatcatttgatcttgctgtgatt
tactctttataccaggagagtctacgaaagcataatcttattgactttgatgattgtctc
ttgtacacttatttgcttctttcagagacaagaaaaaagggacgcgttttactaaaggaa
ctgaagcacgtcctggtagatgaatttcaagacacgaacaaaattcaaatggagctgctc
tatcttctaggacagtgcactgatgatcaaaattttgaggacaatgtcacggttgtggga
gactctgatcaaagtatctacatgtttcgaaacgcagtggcttcaaattttgaaaacatg
atcattcactatcaaaactgtcaggaaataaccttgaaggagaactatagatcgacttct
aatatccttaatttttctgagcagatcatgacccaacagaaagacaggaaacaaaagtca
ttaagatcacaaatttcacatctaaatatcccgattgtttatgtgaggactcagaatacc
ttcaaagaagcagaccacatagcttcagaagtagctaagcttggattaatgtccggtcta
ttaaccagctataacgatattgctatccttttacgttcttcttttcagtctcgtgtcatc
gaacagagtttggtgaccaatcgcataccttatgaagtcgtacatggaagagcattctgg
gaactaaaggaaattcgtgtagcaatggactatttgagagcaattgttaacaattcagac
aacctggccattctccggactttgaacttccccccaagaggagtaggaaacaaaactcta
caaagactagaagaattgattgacaagtccgattgtcctgtcatcgaaacccttgaaatg
gcaatacatgacaagaagaatggatttttgaatgtgaaatccgaaagtggagtgagacaa
tatatagacattctaaaggaatgtggtagactactagattctacatctttagattgcgaa
gcaagtttggaagcctgttttgatcaaattgtccaactagcaaacttgaaagagattaag
aaaacgcctgagacttcaaagggaactcatgattcagaaaatgccctcaaagctgtagag
gaaaacttgaatgagttcaagcgacaattaatagagtataagccaatcattgaccagatc
attactgcagaagctggtgatactccgctcactactagggatgtcctttccagctttttg
gattcaatcgacttgtatgaaacatcgaacaacgagaacaaaaaagattcaaaaaaggga
agagtgacgatatctacaattcatggtgcgaagggtttggaatggccggtagtatttatt
ccaggttgcaccgacggtgttattccctccaaatggactttagaagatgatggtcccgat
tcgtctacaaatttggacgaagatagacgatgtttttatgttgcactaacaagagcaaaa
tcaatgctatatttatcatcatacaaagagagatcaaccccctggagtggagaagaatca
aatgaagtatcgtgctttttaaaaccaacccttaaaatgtttcaaaatcagctggttact
tcaatcagcaacatgtccaaaaactcttggagggatctgtacgaagcaatgggtaaagag
tacaagccagtgtcaaatattttaacagaatcaaacagatcaagaaatcacatcgtctca
accaaagattttctcaaaaataagcaattcaaatcacctttgctaactaaaagcaccaca
gcgccatcatatgtacctgacagatcaaataacaaaaagagaagactaggagtcagaagg
cgaatataa
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