KEGG   Komagataella phaffii: PAS_chr3_0642
Entry
PAS_chr3_0642     CDS       T01092                                 
Name
(RefSeq) Subunit of the SF3a splicing factor complex, required for spliceosome assembly
  KO
K12827  splicing factor 3A subunit 3
Organism
ppa  Komagataella phaffii
Pathway
ppa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PAS_chr3_0642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppa03041]
    PAS_chr3_0642
Spliceosome [BR:ppa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PAS_chr3_0642
 Complex B
    PAS_chr3_0642
 Complex C
   U2 SnRNP specific factors
    PAS_chr3_0642
SSDB
Motif
Pfam: SF3a60_Prp9_C PRP9_N SF3A3 zf-met zf-C2H2_jaz DUF7342 C2H2-zf_KIN17 zf-C2H2_2 zf-FPG_IleRS
Other DBs
NCBI-GeneID: 8199842
NCBI-ProteinID: XP_002492870
UniProt: C4R555
LinkDB
Position
3:complement(1218207..1219736)
AA seq 509 aa
MPSLLESQRLSLEELDRIELEIAERIRRNPDIYKAYFSHNLLGGVKRPLKQTLLQQHEIK
HFLDQYSKKSQQINQEVIKDGEKLFQEIQEIKLDLSGSFKLFGQKIEQLKNNHKMHPNQP
LDELSQLYSMFSSQFENERYPKKRKIVSAFCSDLRLDSIFSLEENYGQFLDLSKFYTQWQ
NLPGNKEADINLHGYISNFSNFKKSFSSVNKNSTEYQVYLTSLYAYLCDFWIKIQPLNEP
EKNILAINAKGVELQNKSDESIQLNQDGSVFCKSCQKSFAKETVYKGHLTGKKHLKNLKG
NGKAPETTNQVPILEFKIREISVLLEKQIQETIKNVERRSHLSERERLMDIEARQQESED
EYDFEGSDEISHGNSDEEGVETLDNGLKVAMGPDGKPIPYWLWKLNGLSLEFNCELCGNV
KYHGRKEFESHFQETRHGHGLRCLGIKPQFFSWFKDISGISEATELWQNIQKEHGIVKDS
DESNIETEDNEGNVMSVKVYNELKKQGLL
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgcctagccttctagagtcacaaagattgtctttggaggaacttgatcggattgaattg
gaaatagccgagagaataagacggaatccagatatatataaggcttacttctctcataat
ttgttaggaggggttaagagaccactgaaacaaactttactccagcagcatgaaatcaaa
catttcctagatcaatatagtaagaaaagccaacaaataaaccaagaggtaattaaagat
ggagaaaagttattccaagagattcaggagataaaactggatctttctggtagttttaag
ctctttggccagaaaattgaacagttgaaaaataatcataaaatgcatccaaaccagcca
ctggatgaactctcacagctatattcaatgtttagcagtcaatttgagaatgaaagatat
cccaaaaagcgaaaaatcgtatctgcattttgctctgatctgaggcttgacagtatcttt
tctttggaagaaaactatggccagttcctagacctttcaaagttttacactcagtggcaa
aatcttccgggaaataaagaggccgacatcaatcttcatggctatatttcaaatttcagt
aacttcaagaaatctttttcttctgttaataagaactctacggaataccaagtatatttg
acaagtctctacgcatatttgtgtgatttttggatcaagattcaaccactcaatgagcct
gaaaaaaacatattggccataaatgcaaagggtgttgagttacagaacaagagcgatgag
tctattcagttgaaccaagacggatcagtgttctgtaaatcatgtcagaagtcatttgca
aaagaaacggtatacaagggacatttaacaggtaaaaaacatcttaagaacctgaaagga
aatggaaaagcaccagagacaacaaatcaagttccaatccttgaattcaaaatacgggaa
atcagtgtccttttggagaaacaaatccaggagactatcaaaaacgtagaacgaaggtct
catctttccgaaagagaaagactaatggatatcgaagctcgccaacaagagtcggaagat
gagtatgatttcgaaggaagcgacgagatatcgcacggcaactcagatgaagaaggtgtc
gaaactttggataatggcttaaaggtagcaatgggccctgacggaaaaccgattccctac
tggttatggaaactaaacggtctttcactggaatttaattgtgaattatgtggaaatgtt
aagtatcatggtaggaaagaattcgaatctcattttcaagagactagacatggccatgga
ttaaggtgtctaggcatcaaacctcagtttttttcttggttcaaggatatttctggtatc
agtgaagcaacagaactatggcagaacattcaaaaggagcatgggatcgttaaggattcg
gatgaaagcaacatagaaactgaagataatgaaggtaacgtcatgtcagtgaaagtctat
aacgagttgaagaagcagggtttattataa

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