Komagataella phaffii: PAS_chr3_0647
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Entry
PAS_chr3_0647 CDS
T01092
Name
(RefSeq) Fumarase, converts fumaric acid to L-malic acid in the TCA cycle
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00020
Citrate cycle (TCA cycle)
ppa00620
Pyruvate metabolism
ppa01100
Metabolic pathways
ppa01110
Biosynthesis of secondary metabolites
ppa01200
Carbon metabolism
Module
ppa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PAS_chr3_0647
00620 Pyruvate metabolism
PAS_chr3_0647
Enzymes [BR:
ppa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
PAS_chr3_0647
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
BAR_4
Mating_N
Motif
Other DBs
NCBI-GeneID:
8199846
NCBI-ProteinID:
XP_002492874
UniProt:
C4R559
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Position
3:1234861..1236327
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AA seq
488 aa
AA seq
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MLRNSSSKLIPQSAAAVRAFSSTVIAKRTESDAFGEIEVPDEKYWGAQTQRSSQNFKIGG
VRERMPEPVVRAFGTLKQATAIVNKDLGVLDPKLSDAIQQAATEVAEGKLIDHFPLVVFQ
TGSGTQSNMNANEVISNRAIEILGGKLGSKKPVHPNDHVNMSQSSNDTFPTVMHIAAVTE
ITNSLIPELTKLRDSFQAKSEEFKDIIKIGRTHLQDATPLTLGQEFSGYVQQLTNGISRV
EKSLESLRFLAQGGTAVGTGLNTKKGFAEKVAEEVTRLTGLQFYTAPNKFEALAAHDAIV
EASGALNVVATSLFKIANDIRYLGSGPRCGYGELSLPANEPGSSIMPGKVNPTQNEAVTM
LCTQVFGNHSTITFAGASGQFELNVFKPVMISNLLSSVRLLADGANSFRLHCVDGIEANP
DRINQLLHESLMLVTALNPKIGYDSASKVAKNAHAKGLTLKQSALELGVLSEEEFDQWVR
PENMIGPK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaaactcctcttccaagttgatcccacaatcggccgctgcagtacgtgccttc
tcctctactgtcatcgccaagagaacggaaagtgatgccttcggagaaatcgaagtacct
gatgaaaagtactggggagcccaaacccaaagatcttcacagaatttcaagattggtggt
gttagagagagaatgccagagcctgtcgttcgagcttttggtactctgaaacaggctaca
gctattgtgaacaaggacttgggagttcttgatccaaagctctctgatgccattcaacag
gctgctactgaggtcgctgagggtaaactaattgaccatttccccttggtggttttccag
actggttccggtacccagtccaacatgaacgctaatgaggtcatctccaacagagccatt
gaaattttgggtggtaagttgggttccaaaaagccagttcatcctaatgaccacgtgaac
atgtctcagtcctctaatgacactttcccaaccgtcatgcacattgcagctgtcactgag
atcaccaatagtctgattcctgaattgaccaaattgagagattcttttcaagccaagtct
gaagagttcaaagatatcattaaaattggtagaactcacttacaggacgccacaccattg
actcttggtcaagagttctctggttacgttcaacaactcaccaatggtatttctcgtgtt
gagaaatctttggagtcccttagatttcttgcccaaggtggtaccgctgttggtacgggt
ttaaacactaagaagggatttgctgaaaaggtcgctgaagaagtcacgcgtttgactggg
ctgcaattctatacagctcccaacaagtttgaagctttggctgcacacgatgccattgtt
gaagcttcgggtgccttgaacgtggtagctacctcgttattcaagattgccaatgatatc
agatacttaggatctggcccaagatgtggttacggagagttgtctttgccagctaacgag
cccggctcttccattatgcctggtaaagttaacccaactcaaaacgaggctgtcactatg
ctttgcactcaagtattcggcaaccattcaacaatcacctttgctggtgcctctggtcaa
tttgaactgaatgtgttcaagccagtgatgatttctaacttgttatcatcagttagactg
ttggctgatggtgccaactccttcagattgcactgtgtggatggtattgaagccaaccca
gacagaatcaaccaattgctgcacgagtctttgatgctggttactgctttgaacccaaag
attggttacgattcggcttcaaaggttgctaagaatgcacatgctaagggcctcaccttg
aagcaatctgctctggaactgggcgtactttctgaggaagagtttgatcaatgggtcaga
ccagaaaacatgattggccctaaatag
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