Pelagovum pacificum: I8N54_08185
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Entry
I8N54_08185 CDS
T06971
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8N54_08185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_08185
Transporters [BR:
ppaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I8N54_08185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_16
Rad17
AAA_22
AAA_29
nSTAND1
NB-ARC
RsgA_GTPase
AAA
RNA_helicase
PRK
NACHT
Sigma54_activat
ABC_ATPase
ATP-synt_ab
NTPase_1
Mg_chelatase
nSTAND3
AAA_13
DUF87
AAA_23
Sigma54_activ_2
Septin
FtsK_SpoIIIE
AAA_10
Motif
Other DBs
NCBI-ProteinID:
QQA44534
LinkDB
All DBs
Position
complement(1656596..1658677)
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AA seq
693 aa
AA seq
DB search
MADDYTGPILEIENLSISFFTRLREIPAVMDFSCTVQPGEAMGLVGESGCGKSTVALGVM
QDLGVNGRIVGGSIKFKGRNLNEMSPDELRDIRGKEIAMIYQEPMASLNPAMRIGRQLME
VPMIHEGVSEKEAYQRALEVVTDVKLPDPERMLKSFPHQLSGGQQQRIVIAMALMANPSL
LILDEPTTALDVTVEAAVVELVKDLGKKYGTSMLFISHNLGLVLETCDRLCVMYSGEAVE
TGSIADVFDKMQHPYTQALFRSIPLPGANKNDRPLIAIPGNFPLPHERPPGCNFGPRCNY
FEEGRCDAQDIPMYEVAGDDRHGTRCLRYEEIDWKAPPEVGARKTKPEPGNVVLKMDNLK
KYYEVAASSLFGGGGKKVVKANETLSFEARESETLAIVGESGCGKSTFAKVLMGLETATD
GQILLDNRNIEGTPIESRDTKTVADVQMVFQNPFDTLNPSMTVGNQIIRALEIFKIGNTQ
KEREQKMLELLDLVKLPRAFAERMPRQLSGGQKQRVGIARAFAGGARIVVADEPVSALDV
SVQAAVTDLLMDIQREQKTTLLFISHDLSIVRYLSDRVMVMYLGHVVELGTTEQVFSPPY
HPYTEALLSAVPIADTSVEKKHIVLEGDIPSAMNPPPGCPFQTRCRWKSEVPGNKCETEV
PPQVTIAEGHQIKCHLSAEKFANMEPVIKVAAE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactacaccggcccgatcctcgagatcgagaacctctcgatctccttcttc
acccgcctgcgggagatccccgcggtgatggacttctcctgcaccgtgcaacccggtgag
gcgatgggcctcgtcggcgaatccggctgcggcaagtccaccgtcgcgctcggcgtcatg
caggacctcggcgtcaacggccgcatcgtcggcgggtcgatcaagttcaagggccgcaac
ctgaacgagatgagtcccgacgaactgcgcgacatccgcggcaaggagatcgcgatgatc
taccaggagccgatggcctcgctgaacccggcgatgcgcatcggccgtcagctgatggaa
gtcccgatgatccacgagggcgtctccgaaaaggaagcctaccagcgcgccctcgaagtc
gtcaccgacgtgaaactgcccgaccccgagcggatgctgaagagcttcccgcaccagctg
tcgggcggccagcagcagcggatcgtcatcgccatggcgctcatggccaacccgtcgctg
ctgatcctcgacgagccgacgacggcgctcgacgtgacggtcgaagcggcggtggtcgaa
ctcgtgaaggacctcggcaagaagtacggcacctcgatgctgttcatctcccacaacctc
ggcctcgtgctcgagacctgcgaccggctctgcgtcatgtattccggcgaggcggtcgag
acgggctcgatcgccgacgtgttcgacaagatgcagcacccctacacgcaggcgctgttc
cgctcgatcccgctgcccggcgcgaacaagaacgaccggccgctgatcgcgatccccggc
aacttcccgctgccccacgaacgtccacccggctgcaacttcggcccgcgctgcaactac
ttcgaggaaggccgctgcgacgcgcaggatatcccgatgtacgaggtggccggcgacgac
cgccacggcacgcgctgcctgcgctatgaggagatcgactggaaggccccgcccgaggtc
ggcgcccggaagaccaagccggagcccggcaatgtcgtcctcaagatggacaacctcaag
aaatactacgaggtcgcggcctcctccctcttcggcggtggcggcaagaaggtcgtgaag
gcgaacgagacgctctccttcgaggcccgcgagtccgagacgctcgccattgtcggcgag
tcgggctgtggcaagtcgaccttcgccaaggtgctgatggggctcgagacggcgacggac
ggacagatcctgctcgacaaccgcaacatcgaggggacgccgatcgaaagccgcgacacc
aagacggtcgcggacgttcagatggtgttccagaatccgttcgacacgctcaacccgtcg
atgaccgtgggcaaccagatcatccgggcgctcgagatcttcaagatcggcaacacccag
aaggagcgcgagcagaagatgctcgagcttctggacctcgtgaagctgccccgcgccttc
gccgagcggatgccgcgtcagctctcgggcggccagaagcagcgcgtcggcatcgcccgc
gcctttgccggcggcgcccggatcgtggtcgcggacgagcccgtctccgcgctcgacgtc
tcggtgcaggcggcggtcaccgatctgctgatggacatccagcgcgagcagaagacgacg
ctgctcttcatctcccacgacctgtcgatcgtgcgctacctctccgaccgggtcatggtc
atgtacctcggccacgtggtggaactcggcacgaccgaacaggtcttctcgccgccctac
cacccctacaccgaggcgctgctctccgcggtgccgatcgccgacacgtcggtcgagaag
aagcacatcgtgctcgagggcgacattccctcggcgatgaacccgccgccgggctgtccc
ttccagacgcgctgccgatggaaatccgaagttccgggcaacaagtgcgagacggaggtg
cccccgcaggtcaccatcgcggagggccaccagatcaagtgccacctctccgccgagaag
ttcgcgaacatggagccggtcatcaaggtcgccgccgaataa
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