Pyxidicoccus parkwayensis: JY651_30460
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Entry
JY651_30460 CDS
T09992
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
ppak
Pyxidicoccus parkwayensis
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppak03000
]
JY651_30460
Transcription factors [BR:
ppak03000
]
Prokaryotic type
Helix-turn-helix
Other families
JY651_30460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_3
GAF_2
AAA_5
GAF
HTH_8
AAA_16
AAA_19
MCM
AAA_22
nSTAND3
AAA
AAA_30
Pre_tape_measure
AAA_7
AAA_2
TIP49
Motif
Other DBs
NCBI-ProteinID:
QSQ19622
LinkDB
All DBs
Position
complement(8117920..8119521)
Genome browser
AA seq
533 aa
AA seq
DB search
MSDEMSGRIEGAQDARDLVELATTEDGVGELLRRGLDWLTRVVRFDLATVFLLKEGRLVA
VAARGPLANAKVRQHALNLSEFPSLRQALETRRARAFTEEDHSHGDGDPFDGVLDLPPGH
SCMVVPLCAGERAYGVLSLDRAECESYPQPVVDLVEVYGQMLATAIQSAEQKATFERMHR
QDHEHAKLLEAELGGETEGILETSLSPVMRDLARRARQVAETDTPVLITGETGTGKERLA
RAIHRWSSRADQPFVTLNCAAIPAGLLESELFGHVKGAFTGATQNRAGRFQMANGGTLLL
DEVGELPVELQAKLLRALQEKTFEPVGGDKTVRADVRILAATHVDLQQAIAQKRFREDLY
YRLSVFPLRLPPLRERREDLPQLCAFLLEEQSRRTGRRDMRVTPAGLARLESYEWPGNLR
ELANALERATILSRGTELGPDAFDLPNRSSEGTQVEASPSEAVPSEAPLKPGAVPTLATV
QREHILRVLTLTRGRVYGPGGAAALLGLKPSTLQSRMKKLGIARLDQFVVDEV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaaatgtcaggccgaatcgaaggcgcgcaggatgctcgggacctggtcgag
ctggcaaccacggaagacggagtgggggagctgctccgtcgaggactggactggctgacg
cgggtggtgcgcttcgatttggcgacagtgttcctcttgaaggaggggcggctcgtcgcg
gtggccgcgcgaggtccgctggccaacgcgaaggtgcggcagcacgcgctcaacctgtcg
gagttcccgtcgctgcgccaggcgctggagacgcggcgcgcgcgggccttcacggaggag
gaccactcgcacggggacggcgacccgttcgacggcgtgctggacttgccgcccggccat
tcatgcatggtggtgccgctgtgcgcgggcgagcgcgcctacggcgtgctgtcgttggac
cgggccgagtgcgagtcgtacccgcagccggtggtggacctggtggaggtgtacgggcag
atgctggccacggcgattcagtccgcggagcagaaggccaccttcgagcggatgcaccgg
caggaccacgagcacgcgaagctcctggaggcggagctcggcggtgagacggagggcatc
ctcgagacgtcgctcagtccggtgatgagggatttggcccgccgcgcgaggcaggtggcg
gagacggacacgccggtgctgattacgggtgagacgggcacgggcaaggagcggctggcg
cgggccatccaccggtggagctcgcgcgcggaccagcccttcgtcacgctcaactgcgcg
gcgattccggcgggcctcctggagagcgagctgttcggccacgtgaagggtgccttcacc
ggggccacgcagaacagggccggccgcttccagatggccaatggcggcacgctgctgttg
gacgaggtgggtgagctgccggtggagctccaggcgaagctgctgcgcgcgcttcaggaa
aagaccttcgagccggtgggcggagacaagacggtgcgcgcggacgtgcgcatcctcgcc
gccacgcacgtggacctgcagcaggcgattgcgcagaagcgctttcgcgaggacctctac
taccggctgagcgtcttcccgctgcggctgccgcccctgcgcgagcggcgtgaggacctg
ccgcagttgtgcgccttcctcctggaggagcagtcgcggcgcacgggccggcgggacatg
cgcgtgacgccggcgggactggcgcggttggagtcctacgagtggccgggcaacctgcgc
gaattggccaacgccctggagcgcgccaccatcctctcgcgcggcacggagttggggccg
gacgcgttcgacttgccgaaccggagcagcgagggaacccaggtggaggcatccccgagc
gaagccgtcccgagcgaggcgccgctgaagccgggcgcggtgcccacgctggcgacggtg
cagcgcgagcacatcctccgcgtgctgacactcacgcgcggccgcgtctacgggccgggc
ggcgcggcggcgctgctggggctcaagccctccacgctgcagagtcgcatgaagaagctg
ggcatcgcccggctggaccagttcgtggtggacgaggtgtga
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