Pteronotus mesoamericanus (Parnell's mustached bat): 129074682
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Entry
129074682 CDS
T09558
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129074682 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129074682 (SKIC3)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129074682 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_17
TPR_14
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_11
ARM_TT21_C
ANAPC3
TPR_9
ARM_TT21_2nd
Sel1
ARM_TT21_5th
TPR_15
Fis1_TPR_C
TPR_30
Retrotran_gag_2
BTAD
TPR_5
TPR_20
Motif
Other DBs
NCBI-GeneID:
129074682
NCBI-ProteinID:
XP_054434584
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNQINAKDDLTRVYKKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEGGADNQELHQLWRKLTQLLPESTEDQNNETQQ
LLLTAFENALDLSDKIPSEDHQVLYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGNLTDEAQQCCCRLVEMDSKSGPGLIGLGIIALKDKKYEDAVRNLTEGLK
ESPQCTTGWYHLAEAQVKMHRSKEAVLSCNQALKNIDNLGVSGGSLHQKNLCLRLKAEAL
IKLSDNESSEEAICTLDQVSDANNIPGLLVLRSLAYLNKGSLEEASKIMEDVLSSYPDLA
EAHALEGFIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLIYWFMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYRDVVGDKSRARGCYRKAFELDDTDTESGAAAVDLSVD
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLRRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKDAIAQYQLIIK
KKEDYVPALKGLGECNLMMAKAALVDYLDGKAVDYIEKALEYFTRALQHRSDVSCLWKLV
GDACTSLYAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLQLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQNLAETDSNVNDPKELLEKSLHCLKKAVRLNSNNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQVNAVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRGTELYRYNILQMN
AIPAAQVVLSKYVERIQNYAPAFTMLGYLNEHLQLKKEAADAYHRAILLLQNAEDHATYN
DAIRNYGRLLCSIGEYDKAIEAFKSTPLEELEDIIGFALALFMKGLYKESSKAYEKALSI
VESEQDKAHILTALAITEYKQGKMDIAKTLLFKCSILKEPTTESLQALCALGLAMQDATL
SKAALNELVKHVKRKDSDYQRCLLTSAIYALQGRSVAVQRQVSKAVHSNPADPALWSLLS
RVVAQHAQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLALGSSSAEDEKNTALKTIQ
KAALLSPDDPAVWAGLMAACYADDKLALVNNTQPKRMDLYLALLSAVSASIKDKEFLGSY
RESLEKWSLSQAVTGLADAGRTAEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLESQKP
LSDAVLDELQKTVMSNSTSVPAWQWLAHVYQSQGMMGAAEMCYRKSLQVASQQGNWSGKL
SSLLRLALLALEVCVANISNDHWPSLVQEATTEALKLCFCPLAVLLQALLQFNRKMGARE
TRRLLERLVYQPGYPKSIVSTARWYLLRHLHAKNDSELIDVLVSNAKTHGDTRALELNQK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtgaagactgcactaaaaagtgcgcgggatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgcaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgagctagaacaacccgatcaggcccag
ggtgcctataagaaagctgctgaactggagccagaccaattactagcttggcaggggttg
gcaagcctgtatgagaaatgtaatcagataaatgctaaggatgacttaactcgtgtttac
aaaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacgtagaggtggcccgaacatggcac
aaattgataaagacacggcaagaaggaggtgcagacaaccaggagcttcatcagctctgg
aggaaattgactcagttgctgcctgagagtactgaggatcagaacaatgagacccagcaa
ttgcttctaactgcttttgagaatgcactggacttatccgataagattcctagtgaagat
catcaagtactttatagacatttcattcagtgtttatccaaatttcctcatgaaactgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttaattgaatcaggaaatcttactgatgaggcgcagcagtgt
tgttgcagactagtggaaatggattcaaaaagcggtccaggcctcattggtttaggcatt
atagcattaaaagacaaaaagtatgaagatgcggttagaaacttaacggaaggattaaaa
gaaagccctcaatgcacaactggatggtatcatctggcagaagcccaagtcaaaatgcat
agatctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggt
gtgtctggtggcagccttcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
attaaactctcagataatgaatcttcagaggaagcaatttgtactcttgatcaggtttct
gatgcgaataacatcccaggacttttggttctcagaagcttggcttatctgaacaaaggc
tcattagaggaagcttcaaagattatggaagatgttctctcttcttaccctgacctagct
gaagctcatgctctggagggttttattcattttactaaaaaggactatctacaagcagaa
aaatgttttcagagagctcttgagaaagacgctgaagttgctgaatatcattatcaactt
gggttaatctattggttcatgggcgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttaaaggctgccaaactggatacatacatgggcaaagttttctgctatttgggt
cattattacagagatgtagtaggagataaaagcagagcccgtggatgttacaggaaagct
tttgaattagatgacactgatactgaatctggagctgcagctgttgatttaagtgtggat
cttgaagagatggaaactgccttagctatcctaacaacagtaactcaaaaggcaagtgct
ggaacagcaaaatgggcctggcttaggcgaggactatactatttgaaagctggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgc
tgggaatcgttaggagaggcctacttacgcagaggtggctatacaacagcattgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaattctaggcaaatataaagatgctatagctcaataccagctgatcattaaa
aagaaagaagattatgtgcctgctttgaaaggtttgggggaatgcaatctcatgatggca
aaagcagctctagttgattatcttgatgggaaagctgtagactacatagagaaagcactg
gaatattttactcgggctctacaacatcgatctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtgaatgttaatgtgtta
ggagtccttctgggtcagaaagaaggaaaacaagtattgaagaaaaatgagctcctccaa
cttggaggaaggtgttatgggcgtgcattaaaactgatgtctacatccaatacttggtgt
gatcttggaattaattattatcgccaagcacaaaatctagctgaaacagacagcaacgtg
aatgatcctaaagaactgttggagaaatcattacattgtctgaaaaaggcagtgagactc
aacagtaataatcacttatactggaatgctcttggcgtggtttcatgttacagtggtatt
ggaaattatgcccttgctcagcattgtttcatcaaatcaatccaatcagagcaagttaat
gctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaagattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttaatgtgctggattgga
caagctctaattgcagaaacagttggaagttatgacaccatggatcttttcaggcatact
acagaacttagcatgcatactgaaggagcaataggttatgcgtactgggtctgtaccacg
ttgcaagataaaagcaacagaggaacagagctgtaccggtacaacatccttcagatgaat
gctatcccggcagcacaagttgttttgagtaaatacgtagaaagaattcagaattatgct
ccagctttcacaatgttgggttatttaaatgagcatctacaactgaaaaaggaagcagca
gatgcataccacagggcaattttgttgttacagaatgcagaagaccatgctacttataat
gatgcaattagaaattatggcaggttgttgtgttccattggtgaatatgataaagctatc
gaggcttttaagtcaacaccccttgaagagttagaagacatcataggttttgcattggct
ttatttatgaagggtctatataaagagagcagcaaagcctacgagaaagctttgtctatt
gttgaatcagagcaagacaaagcccatatcttgacagctctggcaataacggagtataaa
caaggaaaaatggacatagccaagacattgctatttaaatgttctatcttaaaggaacca
accacagagagccttcaagccctgtgtgctctgggattggcaatgcaggatgctacgctg
tcaaaagcagcacttaacgagttagtgaagcatgtcaaacggaaagacagtgattaccag
aggtgccttcttacttcagcgatttatgcgctgcaaggccgcagcgtggccgtgcagaga
caagtctctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtggttgctcagcatgctcaacgaaatgcaaagggaggtgctgtagcaggaaatgtg
gctcatattctggattcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttggccttgggaagcagttcagcagaagatgaaaaaaatactgccttaaagaccattcag
aaggcagcactcctttctccagatgatcctgctgtctgggctggactaatggcagcctgt
tatgctgatgataagcttgctctagtgaacaacactcagccaaagaggatggatttatac
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattccttggaagttac
cgtgaatctcttgaaaagtggtctctgtcccaagctgtcactggtctggccgacgcagga
agaacagctgaagctgaagccctttgcacaaagaatttaaagagtaaccctgatcagcca
gctgttatcttacttttgagacaagttcagtgtaaaccactcctggaatcacaaaagcct
ctctcagatgctgtacttgatgagctgcaaaaaacagtcatgtccaactcaacctctgtt
ccagcctggcagtggttggcgcatgtatatcagtctcaaggaatgatgggtgctgcagaa
atgtgttataggaagagcctacaagtcgcatctcagcagggcaattggagtgggaagctc
tcaagtctgttgaggctagcactgcttgcattagaagtctgtgtggccaacatttccaat
gatcactggccctccttggttcaggaagctacaactgaggccttgaaactctgcttttgt
ccactggctgtccttttacaagctttgttacagttcaaccgcaaaatgggggcaagagag
acacggcgacttttggagaggctggtgtatcagcctggctatcccaaatctattgtgtca
actgcacgttggtaccttctgaggcacttacatgccaaaaatgactctgagctcattgat
gtgctggtgagcaatgccaaaactcatggagatacaagggcattggaactgaatcaaaaa
ttatcctcacaataa
DBGET
integrated database retrieval system
