Pteronotus mesoamericanus (Parnell's mustached bat): 129075296
Help
Entry
129075296 CDS
T09558
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129075296 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129075296 (CNOT1)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129075296 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129075296 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
129075296
NCBI-ProteinID:
XP_054435341
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIVQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLGPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEASNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggataattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctccacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcgccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaagcagaagctcccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ttacacctcctcctctcccatctcctctttgggcagaagggagcctttggagtcggacag
gagcagatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgccgcaatataatcgtgcagttt
ggtgttcgggaggttacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cactcaggattaacagatggaattccactacagagtatctctgctcctggaagtgggatc
tggagtgatgggaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaattttaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtctgggtatggaagtgttcccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccggaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctactgaggctt
gcagaggtggggcaatatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccggacatgctagtattggccttattacagatcaacacctcctggcacaccttgcgccat
gaactcatctccactttgatgccaattttccttggaaaccatcctaactctgctattatt
ttgcactatgcatggcacgggcagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaagctgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttatcgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttcttg
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcgacaatgttggcctgtttacaagcttgtgcgggg
agtgtttctcaggagttatcagaaaccatccttaccatggtagccaattgcagtaatgtt
atgaataaggccagacaaccaccacctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcgtttccacccctttctacccca
aatcagacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgaccggtataggaactggggcccttggacttcctgcagtgaat
aacgatccttttgtgcagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgggaagtatttaattgtatgctaaggaacttgtttgaagaataccgg
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttacatggcactaggcctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagatagg
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcagtttccacatcatttgcaggagtatatcgagtatggacagcaatctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagcgccccttgctggacaggttagcactatggta
accacctcaacaaccaccactgttgctaaaacagttactgtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacactgcttgtg
gccacagaccaaactgaaagaattgtagagcccccggaaaatatccaagagaaaattgct
tttatcttcaataatctctcccagtcgaatatgacacaaaaggttgaagaactaaaggaa
actgtgaaggaagaattcatgccttgggtttcacagtacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacgctgaagaatcccgaa
tttaataagatggttttaaatgagacctacagaaacatcaaagtgctactgacctctgat
aaagctgcagccaatttctcagatcgttctttgctgaagaacttgggacattggctagga
atgatcacactagctaaaaataaacccatcttacatactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctacgtggtgccctttgttgcc
aaagtcttagagtctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacccgga
aacctcctgaaggataaagatcgcctaaagaacctagatgagcagctctctgctccaaag
aaagatgtcaagcagccggaagaactccctcctatcacaaccacaacaacttctacaaca
ccagctaccagtaccacctgtacagccacggttccaccacagccccagtacagctatcat
gacatcaatgtctattccctcgcaggtcttggcccacacattactctaaacccaacaatt
cccttgtttcaggcccacccgcagttgaagcagtgtgtgcgccaagcaatagagcgggct
gtccaggagttggtccatcctgtggtggatcgatcaattaagatcgccatgactacttgc
gagcaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagcatatccacaaacctgaaaaacagctttgcctcagcccttcgtactgca
tcgccacaacaaagggaaatgatggaccaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggat
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacctaccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagaatttgcacgcaatgtgcct
ggcttcttgcctacgaatgatttaagtcagcccacgggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcaaatttatgataagtgcattacagaactagag
cagcacctgcatgccatcccaccaacgttggccatgaaccctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtggagggcttactagatgccacaagtggtgctgatgctgaccta
ctgctgcgctacagggaatgccacctcttggtcttgaaagcccttcaagatggccgggca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagttgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctgttccacaccattgaaaccctcatgagaattaatgctcactcaagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaagactgatgac
ctcataacaaggttctttcgtctgtgtactgaaatgtgtgttgaaatcagctaccgtgct
caggcagagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgtccgactcattgcactgctagtgaagcactcaggggaggcc
tccaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctgcaggatcatgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatt
tttatcatgctgctcttggaactcaatgcacctgagcatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacgttccacatcttgaggcctaccaaagctcctggc
tttgtgtatgcctggctcgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaaggggtggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaacgtggaactcaccaaacctatgcaaatcctctataag
ggcactttaagagtgctgctggttcttctgcatgatttccctgagttcctttgtgattac
cattatggattctgtgatgtgatcccacctaattgtatccagctaagaaatctgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgaaataaacattgcaccccggattctcaccaattttactggagtgatgcca
cctcaattcaaaaaggatttggattcctatcttaaaactcggtcaccggtcacttttcta
tctgatctgcgcagcaacctacaggtatccaatgagcctggcaatcgttacaacctgcag
ctcatcaatgcactggtgctctatgtcgggactcaggccattgcgcacattcacaacaag
ggcagcacaccttcaatgagcaccatcacccactcagctcacatggacatattccagaac
ctggctgtggacttggacactgaaggtcggtatctcttcttaaatgcaatagcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgttatacctttttgca
gaagccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctacttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttattc
cagtcggttgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaaggcaca
ggcgccagttag
DBGET
integrated database retrieval system
