Paracoccus pantotrophus: ESD82_06890
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Entry
ESD82_06890 CDS
T06495
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppan
Paracoccus pantotrophus
Pathway
ppan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ESD82_06890 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppan03400
]
ESD82_06890 (xth)
Enzymes [BR:
ppan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ESD82_06890 (xth)
DNA repair and recombination proteins [BR:
ppan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ESD82_06890 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QFG35867
LinkDB
All DBs
Position
2:complement(1427270..1428055)
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AA seq
261 aa
AA seq
DB search
MKIATFNINGVRARIETLTGWLADAQPDVVVLQEIKTQDEGFPREPIADLGYNIETHGQK
GFNGVAILSKLPLEDVSRGLPGDETDEQARYIEATVVGHRALRIAGLYLPNGNPQPGPKF
DYKLAWMERLRARGKALLATEMPAVMLGDYNVIPEPRDAAFPEKWLDDALFQPESRAALR
RILFDGWADAVRLRHPGSTRGPFTFWDYQAGAWQRDNGIRIDHVLLSPQAADLLIDVGID
RDERAKDKPSDHVPVWIDLDA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgacattcaacatcaacggcgtccgcgcccgtatcgagaccctgaccggc
tggctcgccgacgcccagcccgatgtcgtggtcctgcaagagatcaagacccaggacgag
ggcttcccgcgcgaacccatcgccgacttgggctacaatatcgaaacccacgggcaaaag
ggcttcaacggcgtcgccatcctgtccaagctgccgctggaggatgtcagccgcggcctg
ccgggcgacgagacggacgagcaggcccgctatatcgaggcgactgtggtcggccatcgc
gcgctgcgcatcgccgggctctatttgccgaacggcaacccgcagccggggccgaaattc
gactacaagctggcctggatggagcggctgcgcgcgcggggcaaggcgctgctggcgacc
gagatgccggcggtgatgctgggcgattacaacgtcatccccgaaccccgcgacgccgct
ttcccggaaaaatggctggacgatgcgctgttccagcccgaaagccgcgccgcgttgcgc
cgcatcctctttgacggctgggccgatgcggtgcgtctgcgccatccgggcagcacgcgc
ggtcccttcaccttctgggactaccaggcgggcgcctggcaaagggacaacggcatccgc
atcgaccatgtgctgctgtcgccgcaagccgccgacctgctgatcgacgtcggcatcgac
cgcgacgaacgcgccaaggacaagcccagcgaccatgtcccggtctggatcgatctcgac
gcctga
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