Phlebotomus papatasi: 129805303
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Entry
129805303 CDS
T10447
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ppap Phlebotomus papatasi
Pathway
ppap03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129805303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppap03400
]
129805303
Enzymes [BR:
ppap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129805303
DNA repair and recombination proteins [BR:
ppap03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129805303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
RNA_ligase
BRCT_2
DNA_ligase_A_C
DNA_ligase_IV
mRNA_cap_enzyme
Bromo_TP_like
Motif
Other DBs
NCBI-GeneID:
129805303
NCBI-ProteinID:
XP_055709101
LinkDB
All DBs
Position
3:32255643..32277414
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AA seq
920 aa
AA seq
DB search
MSSNENVSCLSKSIKFSSVTELFEKIRETKNAHRKEELLKIFLQTFRNFRENAQKSDKDQ
NTSFYPILRLLLPNCDLERGSYGIKEATLGRLYIRVLGIDGKSTEAKTLLEGNPSCADYG
EVVYQVMRARSKLESEITVFEVNQGLDSIVNHFQNGHMKKIDDVLVKFISEMTAIDQKWL
TRVILKHLPLGIGRQKILNILHPQAIQIYNSSSNLSAVCELMNAPESFTNSASSSHFDIE
SIKIFNHVKPMLLARISLHLLKETVNQGEYFIETKMDGERFHMHRSGSEYRFFSRNGHNY
SDKFGKDFTSGSITPFIHSLIAKNVDSIILDGEMMVWNREESFFYTKGDNYDVKNLQRDD
PTLRPVYCVYDVIFLNGESLTKKPYAERRRLLATLVTEKPGTLILGTYKKLRDFDHVLEC
FNEAIDKCEEGIVIKKMSSHYRPGERAIQTGWFKIKPDYVEGAVTDLDLLIIGGYYETRK
RYIDSYLMGIYANGPGERTDPIFHSVAKVSTRGLKFVERRKLNEDLREHWKVVEMEKGGG
RRGGSSVAPQCLEWKNAVPDVWIEPSKSIVLEIKATELTRTDNFRTSHALKFARIVGVRA
DKPWYDSCTLAEFEQLCGKSGTTGVEKLAKRHITRDDAKKRVTKRQKVVEMGNSRRFIDH
MEKVSKICENLNFCILSTSRNMPSIEEIRELILKHSGQIVENPSSTTFAIIAGDVTLNVR
KYAEKKLYNIVKVEWLMRVLGSAAEIPKKLPKFHPKDMISCTRDLEDYFTKSYDDYGDSY
TIPVNCAILKDLLCDFQLDRSQRLLRRELIAIANEINVTGNFFRPFSIYFFAVNQCRSTK
LAEIMFKSHHGNVINEFISSDSTIIAINPIEEFLVQFRQQFSNAKENEGEIKLISIEWIT
KSHHQGKIEEMSNYLIPLCN
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaatgaaaatgtgtcctgcttgtcgaaaagtatcaaattctcaagtgttact
gagttatttgagaaaattcgtgaaacaaaaaatgctcataggaaggaggagttgttgaag
atattcctccagacttttcgcaatttccgggaaaatgcccagaaaagcgataaggatcag
aatacaagtttttacccaattcttcggttgttgcttccgaattgtgatctggaaaggggc
tcatatggtatcaaagaagcaactctggggcgcctctacatccgggtgttgggaatagat
ggtaaaagcaccgaggctaaaaccctactggaaggaaatccaagttgtgcggattatgga
gaagttgtctaccaagtgatgagagcaagatcaaagttggagtcagaaataaccgtgttt
gaggtcaatcaggggcttgattctatcgtcaatcatttccagaatggtcatatgaagaaa
atcgatgatgttctcgtgaagttcatctctgaaatgacagcaattgatcaaaagtggctt
acgcgggttatcctaaagcacctaccgctgggaatcggtaggcaaaagattctcaatatc
ctgcatcctcaagcaattcagatctacaatagcagcagcaatctctccgcggtttgcgaa
ttaatgaatgcacctgagtcattcaccaattctgcaagttcctcacacttcgatatagaa
tccataaaaattttcaatcatgttaagccgatgctcctggccagaataagcctgcactta
ttgaaggaaacggtgaatcagggtgaatattttatagagacaaaaatggacggagaacgc
tttcatatgcatcgttcaggatccgaatatcgatttttctcaagaaatggacacaactac
agtgataaatttggcaaggactttacatcagggagtattacaccgttcattcacagtctc
attgccaagaatgtggacagcatcattctcgacggggaaatgatggtgtggaatcgagag
gagtcatttttctacaccaaaggagacaactacgatgtaaaaaatcttcagagggatgat
cctacgcttcggccagtttattgtgtgtacgatgtgatatttctcaatggagaaagtctc
acaaagaaaccatatgcggaaagaaggcgactccttgccactcttgtgaccgaaaagccg
ggaactctcatcttgggaacgtacaaaaaactgagggattttgaccatgtccttgaatgc
ttcaatgaggccatagataaatgtgaagaggggatcgtgattaagaaaatgagctcgcac
tatcgaccaggcgaacgagctattcaaacaggatggttcaaaattaaaccagattatgtg
gagggtgcggtgactgacctggatttgctaattattggaggatactatgagactcgaaag
cgatacattgattcgtatctcatgggtatttatgcaaatgggcctggtgagaggacagat
ccaatatttcattcagtggcaaaggtcagtaccaggggtctaaagtttgtggagaggcgt
aaattaaatgaagatttgagggaacactggaaagtggtggagatggagaagggtggtggc
agaagagggggatcttctgtggcaccacaatgtcttgagtggaaaaatgctgtgccagat
gtatggattgagccgtccaagtcgattgtgttggaaatcaaggcgaccgaattgacgaga
actgacaattttcgcacgagtcatgctctaaaatttgcacgtattgttggtgtgagggcg
gataaaccatggtatgattcctgtacattggcggaatttgagcaattgtgtggaaaaagt
gggacaacaggtgttgagaagctggcaaagaggcatataacgcgagatgatgcgaagaaa
agggtcacaaagcgtcagaaagtagttgagatgggaaattcaaggagatttatcgatcac
atggaaaaagtgtcgaaaatttgtgaaaatttaaatttctgcattctcagcacttcgcga
aatatgccgtcaattgaggagattcgtgagttgattttgaagcacagtgggcaaattgtc
gaaaatccctcatctacaacatttgccataatagctggtgatgtgacgctcaatgtacgt
aagtacgccgagaagaagctttacaatatcgtcaaagtggagtggttgatgagggtgttg
gggagtgcagcagagattccgaaaaaattgcccaaatttcatccaaaggacatgatttct
tgtacaagagatcttgaggattactttacaaaatcctacgatgattatggtgattcatac
acaattccggtgaattgtgccatcctgaaggatctcctgtgtgactttcaacttgatcgg
agtcagagattactcaggagagaactaatagccattgcgaatgaaattaatgtaacagga
aatttcttcaggcctttttccatttactttttcgctgttaaccaatgccgttcgacaaaa
ttagcagaaataatgttcaagtcacatcacggaaatgtgattaatgaatttatttcttca
gattcaacaataattgctataaatccaatcgaagaatttttggttcaatttcgccaacaa
ttttccaatgcaaaagagaacgaaggagaaattaaactaatttccattgaatggataaca
aagagtcaccatcaaggaaaaatagaagaaatgtccaactatcttattcctttatgtaat
taa
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