Pseudomonas putida BIRD-1: PPUBIRD1_0217
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Entry
PPUBIRD1_0217 CDS
T01975
Symbol
hemD
Name
(GenBank) HemD
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00860
Porphyrin metabolism
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01120
Microbial metabolism in diverse environments
ppb01240
Biosynthesis of cofactors
Module
ppb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
ppb_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PPUBIRD1_0217 (hemD)
Enzymes [BR:
ppb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PPUBIRD1_0217 (hemD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
ADR57923
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Position
265424..266191
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AA seq
255 aa
AA seq
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MSQWRLLLTRPAEDCAALAQSLAAAGVGSSCLPLLEIEPITVQAPQRLSLEGLHDFQAII
VVSKPAARLLLEHLAETSIQPPQRGWFTVGEATAGVLQGAGLEVSFPPRGDDSEALLALP
ALRQALTELAPRVLIVRGVGGRELLAERLAEQGASVEYLELYRRCLPAYPAGTLMRRIEA
ERLNGLVVSSGQGFEHLQQMAGADWLRLAQLPLFVPSPRVAEQAKAAGAQQVVDCRGASA
TALLAAVQRSAAPAS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaatggcgcctgttgctgacccggcctgccgaggactgtgcggcgctggcgcaa
agcctggcggctgcgggagtgggcagcagttgcctgccactgctggaaattgaacctatt
accgtgcaagccccacagcgactgtcgctggagggcttgcatgacttccaggcgatcatt
gtggtcagcaagccggccgcccggctgttgcttgagcatctggccgagaccagcatccag
cctccgcagcgaggctggttcaccgtgggtgaggcaaccgccggggtgctgcagggtgct
gggctggaggttagctttccgccgcgtggcgatgacagcgaagccttgctggcactgccg
gccctgcgccaggcacttaccgagctggcaccgcgtgtcttgatcgttcgcggcgtcgga
ggtcgcgaactgctggcagagcgtcttgcagagcaaggtgctagtgtcgaatatctggaa
ctgtatcgtcgctgcctgccggcctacccggcgggtacgctgatgcgccgcattgaagcg
gaacgcctcaatggcctggtggtcagcagtgggcagggttttgaacatttgcagcagatg
gccggtgccgattggctgcggttggcccagttgccgctgttcgtgcccagcccgcgggtc
gccgagcaggccaaggccgccggggcccaacaggttgtggattgccgtggcgccagtgcc
acggccttgctggcagccgtgcagcgtagcgctgcacctgcctcttaa
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