Pelobacter propionicus: Ppro_2068
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Entry
Ppro_2068 CDS
T00436
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03030
DNA replication
ppd03430
Mismatch repair
ppd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ppro_2068
03430 Mismatch repair
Ppro_2068
03440 Homologous recombination
Ppro_2068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppd03032
]
Ppro_2068
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_2068
Enzymes [BR:
ppd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ppro_2068
DNA replication proteins [BR:
ppd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ppro_2068
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ppro_2068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ABK99676
UniProt:
A1AQQ6
LinkDB
All DBs
Position
2218329..2221883
Genome browser
AA seq
1184 aa
AA seq
DB search
MEPSETSQHPPQAPFVHLHVHTQYSLLDGAIRLEDLIAKAKAHNMPALAITDHGNMFGAV
EFYLKCKKAGIKPLIGCEVYIAPDSRFSRESTRGISEAAYHLILLCENMQGYRNLSYLTS
AGYKEGFYYRPRIDRELLQEHSEGLIALSACLKGEVAMQCFRDRMDDALETARWYSQLFP
DRYYIELQENTLPEQDVVNKRLMEVAATLQLPLVATNDCHYLNREDARAHEVLLCIQTGK
TMSDPSHMKFSAEEFYVKSPEEMVAAFGYAPEAVSNTLKIADRCDLKLPLDTGEYHFPHF
DPPAGKNHDDMLEELAVQGLKERMVTILAKYPDMSLERRQAYFERLQIELKCIREMQFPA
YFLIVSDFITWAKNKGIPVGPGRGSAAGSLVAYAIRITDLDPLPYNLLFERFLNPERITM
PDIDVDFCQDRREEVIQYVIEKYGRERVCQIITFGTMKAKAVVRDVGRALNMTYGDVDRI
AKLIPDDLKMTLAKALKQEPQLNEMAERDPQVRDLLDTALCLEGLTRHASTHAAGVVVAP
RQLEEFLPVYKDQKTGSINTQYSMKYVEMVGLVKFDFLGLKNLTVIENAVHLVRAGKDPD
FDITRLRDDDSESYDLISSGNTTGIFQLESSGMKEMLVKLKPSCFEDVIAACALYRPGPL
GCGMVDEFIERKHGRQKVVYDLPQLEPILKDTYGVIVYQEQVMQISRTLAGYSLGRADLL
RRAMGKKDPAVMAKEKEPFLEGAKAQGIDPKKAEAIFDQMAKFAEYGFNKSHSAAYALIA
YQTAWLKSHYPVEFLAALLTCDMDSTDKVIKNINDCREQGIEVLPPDVNKSGLTFTVVGN
SMRFGLGAVKGVGTGAVEAILEARQDGPFKDVYDFCERVDMRRSNKKVLEALIKCGAFDS
TNAPRAAMMEGLETAMNFGQRIQQERASAQVSLFGDDEVARSGGNGHRLPDVPEWHDKEK
LALEKEALGFLITGHPLDRYVDDIKRLNCVEISRLTEQADGGEIRVCGIVSSLKEITTKK
GDRMGFVTIEDLTGSVEVTVFSDIYTSAVSLLKGDDPLLIDGKLERGEKGAKILVRGQSE
GASEWQLKQRGPAGDIRHLLDVRAQSTKRVVFTLLTDETPPEHLEVLKGIIERHQGSVPT
EIQFLIPQRSRSTLALPESMNVAASDDLRLEVERLFGYNAASFE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatccgaaaccagccagcacccccctcaagcccccttcgtccatcttcatgtt
cacacccagtactcgctgctggacggcgccatccgcctggaggacctgatcgccaaggcc
aaggcccacaacatgccggccctggccatcaccgaccacggcaacatgttcggcgccgtg
gaattctacctgaaatgcaagaaggccggcatcaagccgctgatcggttgcgaggtgtac
atcgcccccgactcccgcttctcccgcgagagcaccaggggcatctccgaagctgcctac
cacctgattcttttatgcgaaaacatgcagggttaccggaacctctcctacctgacctca
gccggctacaaggagggattctactaccgtccccgcatcgaccgcgagctgctgcaggag
catagcgaggggctgatcgccctgtcggcctgtctcaaaggtgaggttgccatgcagtgc
ttccgggaccgtatggacgacgccctggagaccgcccgctggtacagtcagctcttcccg
gatcgttactacatcgagctgcaggagaacacccttcccgagcaggacgtcgtcaacaag
cgcctgatggaggtggccgcgacgcttcagctgccgctggttgccaccaacgactgccac
tacctgaaccgcgaggatgcccgcgcccacgaggtgctgctctgcatccagaccggcaag
accatgagcgatcccagccacatgaagttctcggcggaggagttctatgtcaagagcccg
gaggagatggtcgccgccttcggctacgcccccgaggcggtgtccaacaccctgaaaatc
gccgatcgctgcgacctgaagctccccctggacaccggtgagtaccacttcccccacttc
gacccgccagccggcaagaaccacgacgatatgctggaggagctggccgtgcaggggttg
aaggaacgcatggtcaccatcctggccaaatacccggacatgagcctggagcgccggcag
gcctactttgaacgtctgcagatcgaactgaagtgcatccgcgagatgcagttcccggcc
tacttcctgattgtgtccgacttcatcacctgggccaagaacaagggcatcccggtggga
ccgggcaggggttcggccgcgggatcgctcgtggcctacgccatccgcatcaccgacctg
gacccactgccctacaacctgctgttcgagcgcttcctcaacccggaacgcatcaccatg
cccgatatagacgtggacttctgccaggaccgccgcgaagaggtgatccagtacgtgatt
gagaagtacggccgggagcgggtctgccaaatcatcaccttcgggaccatgaaggccaag
gcggtggtgcgcgacgttggccgtgccctgaacatgacctacggcgacgtggacaggatc
gccaagctgatcccggacgacctgaagatgaccctggccaaggcgctcaagcaggagccg
caactgaatgagatggcggaacgcgatccccaggtcagggacctgctggacacggccctc
tgtctggagggactgacccgccacgcatccacccacgccgccggcgtggtggtggccccc
cgccagctggaggaattcttgccggtgtacaaggaccagaagaccggctccatcaacacc
cagtactccatgaagtacgtggagatggtaggcctggtgaagttcgacttcctgggctta
aagaacctgaccgtgatcgaaaacgcggtccatcttgtgcgggccggcaaggatccggat
ttcgacatcacccgcctcagggacgacgacagtgagagctatgacctgatctccagcggc
aacaccaccggcatcttccagctggaatccagcggcatgaaggagatgctggtcaagttg
aaaccttcctgcttcgaggacgtgatcgccgcctgcgccctctaccgccccggccccctg
gggtgcggcatggtggacgagttcatcgagcgcaagcatggccgccagaaggttgtctac
gacctgccacagttggagccgatcctgaaagacacctatggggtcatcgtctatcaggaa
caggtcatgcagatctcgcgcaccctggccggctactccctgggccgcgccgacctcttg
cgccgcgccatgggcaagaaggatcccgcggtcatggccaaggagaaggaaccgttcctg
gagggggccaaggcccaggggatcgaccccaagaaagccgaggcgattttcgaccagatg
gccaagttcgccgaatatggcttcaacaagtcccactcggcagcctatgccctgatcgcc
taccagacagcctggctcaagtcccactacccggtggagttcctggctgcgctcctgacc
tgcgacatggacagcaccgacaaggtgatcaagaacatcaacgactgccgcgaacagggg
atcgaggtgctgccgccggatgtgaacaagtccggactcaccttcaccgtggtgggcaac
tccatgcgcttcggtcttggggcggtcaagggggtcggcaccggcgcggtggaggccatc
ctggaggcccgccaggatggccccttcaaggatgtctacgacttctgcgagcgggttgac
atgcgccgctctaacaagaaggttctggaggcgctgatcaagtgcggcgccttcgactcc
accaacgccccccgggcggctatgatggaggggctggaaacggccatgaacttcggccag
cgcatccagcaggagcgtgccagcgcccaggtttcactgttcggcgacgacgaggtggcg
cggagcggcggtaacggccacaggctccccgacgtaccggaatggcacgacaaggagaag
ctggccctggagaaggaggccctgggcttcctgatcaccggccatcccctggaccgctac
gtggacgacatcaagcggctgaactgcgtggagatttcccgcctgacggaacaggccgac
ggcggcgagatacgggtctgcggaatcgtttcctctcttaaggagatcaccaccaagaag
ggtgaccgcatgggtttcgttaccatcgaggatctgaccggttccgtggaggtgacggtc
ttttcggacatctacacaagcgccgtctccctgctgaaaggggacgaccccctgctgatc
gacggcaagctggagcggggagagaaaggagccaagatactggtgcgcggccagagcgaa
ggagccagcgaatggcagctgaaacagcgcggcccggccggcgacatccgccacctgctg
gacgtgcgtgcccagagcaccaaacgggtcgtattcaccctgctcacggacgagaccccg
ccggagcacctggaggttctgaaagggatcattgagcgccaccaggggagcgtgccgacg
gaaatccagttcctgattccccagcgcagccggtccaccctggcgctgccggaaagcatg
aatgtggcggccagcgatgatttaaggctggaagtggaacggttgttcggctataatgcc
gcttctttcgagtga
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