Polaribacter pectinis: H9W90_06030
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Entry
H9W90_06030 CDS
T08187
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec00541
Biosynthesis of various nucleotide sugars
ppec01100
Metabolic pathways
ppec01250
Biosynthesis of nucleotide sugars
Module
ppec_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H9W90_06030 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppec01005
]
H9W90_06030 (kdsB)
Enzymes [BR:
ppec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
H9W90_06030 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ppec01005
]
Lipid A
H9W90_06030 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
PilZNR
RHG29_45_N
Motif
Other DBs
NCBI-ProteinID:
QNM86676
UniProt:
A0A7G9LDH7
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Position
complement(1277725..1278459)
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AA seq
244 aa
AA seq
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MKIIAMIPARYSASRFPGKLMKDLGGKSVILRTYEAALNTNLFDDVYVVTDSDIIFNVIS
NAGGKAIMSKKEHECGSDRIAEAVENIDADIVINVQGDEPFIDEISLSKLIDVFKNDAKK
EIDLASLKVQITNKEDVENPNNVKVITDIDNLAIYFSRSVIPYHRDKEINVKYYKHKGVY
AFRKQALLDFYNTPITPLEASEKIEAIRYQEIGKKIKMVETDVEAVGIDTPEDLEKAKKY
LGIK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattgcaatgattcctgcacgttatagtgcatctcgttttccagggaaatta
atgaaagatttaggaggtaaatctgttattttaagaacttatgaagctgcattaaatact
aatttatttgatgatgtttacgtagtaacagattctgacattatttttaatgtaatttct
aatgctggaggaaaagcaattatgagtaagaaagaacacgaatgtggttcagacagaatt
gcagaagctgtagaaaatatagatgcagatatcgtaattaatgttcaaggagatgaacca
tttatagacgaaatatctttatctaaactaatagacgtttttaaaaatgatgcaaaaaaa
gaaattgatttagcgtcattaaaagtacaaattaccaataaagaagatgtcgaaaaccct
aataatgttaaggtaattacagatatagataatttagccatttatttttctagaagtgtt
attccatatcatagagataaagaaataaacgtaaaatattacaaacataaaggtgtatat
gcttttagaaagcaagctttattagatttttataatacgccaataacacctttagaagct
tcagaaaaaattgaagcaattagatatcaagagattggtaagaaaattaaaatggtggaa
acagatgtggaagctgttggaatagatactccagaagatttagagaaagcaaaaaaatat
ttaggaataaaataa
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