Prunus persica (peach): 18768065
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Entry
18768065 CDS
T03092
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18768065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18768065
03009 Ribosome biogenesis [BR:
pper03009
]
18768065
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18768065
Ribosome biogenesis [BR:
pper03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
18768065
Pre-60S particles
18768065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
TOR1L1_N
HEAT_2
TPR_DNAAF5
HEAT_MROH2B_C
TPR_IMB1
CEP104-like_TOG
Vac14_Fab1_bd
HEAT_MROH2B_1st
Usg
Motif
Other DBs
NCBI-GeneID:
18768065
NCBI-ProteinID:
XP_020425858
LinkDB
All DBs
Position
G8:17402893..17415277
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AA seq
895 aa
AA seq
DB search
MAASASWQPKEEGFAEICGLLEQQISHSSSSADKSQIWQQLQHYSQFPDFNNYLAFILAR
AEGKSVEIRQAAGLLLKNNLRNAYKSMAPAYQQYIKSELLPCLGAADRHIRSTVGTIISV
VVQLGGILGWPELLQALVNCLDSNDLNHMEGAMDALSKICEDIPQLLDSDVPGLPERPIN
IFLPRLLKFFESPHSSLRKLSLGSVNQYIMLMPGALYASMDQYLQGLFVLSNDPSSEVRK
LVSAAFVQLIEVRPSFLEPHLRNVIEYMLRVNKDTDEEVALEACEFWSAYCDAQLPPENL
REFLPRLIPVLLSNMVYADDDESLIDAEEDGSVPDRDQDIKPRFHSSRAHGSESVEDDDD
DIVNVWNLRKCSAAALDILSNVFGDEILPTLMLFVQTKLATSEDETWKEREAAVLALGAI
AEGCITGLYPHLTEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGVEHQVGYEQFDK
VLVGLLRRILDNNKRVQEAACSAFATLEELQEAAEELAPRLEMILQHLMCAFGKYQRRNL
RIVYDAIGTLADAVGGELNKPAYLEILMPPLIAKWQQLLNSDKDLFPLLECFTSISQALG
AGFSQFAEPVFQRCISIIQSQLLAKADPVSSGVPYDKEFIVCSLDLLSGLAEGLGSGIES
LVSQSNLRDLLLQCCTDDAPDVRQSGFALLGDLARVCAVHLRPRLPEFIDVAAKQLNTPK
LKETVSVANNACWAIGELAVKVRQEISPIVLTVISCLVPILQHAEELNNKSLIENSAITL
GRLAWVCPELVAPHMEHFMQSWCIALSMIRDDFEKEDAFRGLCALVRANPSGALSSLIYL
CNAIASWHEIRSEELHNEVCQVLHGYKQMLVNGAWDQCMSALEPPVKDKLSKYRV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagtgcctcgtggcagccaaaggaagaagggttcgcggagatctgcgggttg
ctggagcagcagatttcccattcgtcttcttccgctgacaagtctcagatttggcagcaa
cttcaacactactctcagttccctgatttcaataactacctcgctttcattctcgcacgt
gccgagggtaaatcagtggagatacgacaagctgcgggattgcttttgaagaataacctt
agaaatgcatataagtccatggctccagcataccagcaatatattaaatccgaattgttg
ccttgcttaggagcagcagacagacacatcaggtctacagttggcaccattataagtgtt
gttgttcaactagggggaattttggggtggcctgaactattgcaagctcttgtaaattgt
ttagacagtaatgacctaaatcacatggaaggtgctatggacgcattatccaagatttgt
gaggatatacctcaactgcttgattcagatgtacccggtttgcctgaacgtcccatcaac
atattccttccaaggttactgaagtttttcgagtcaccacattcatctctaagaaagctt
tccctgggttctgtaaatcaatacattatgttgatgccaggtgctctatatgcatccatg
gatcaatatcttcaaggtttatttgtcctttctaatgacccttcttctgaagtgaggaaa
ttagttagtgcagcatttgttcagctaattgaagtccgtccatcattcttggagccacat
ttgaggaatgtaattgaatacatgttgcgagtcaacaaggacaccgatgaagaagtggct
cttgaagcctgcgaattctggtctgcatattgtgatgctcagttaccgcctgagaattta
agagaatttttgccacgtttaattccggttttgttgtcaaacatggtttatgctgatgat
gatgagtccctcattgatgctgaggaggatgggtcggttccagaccgtgatcaggatatc
aaacctcggtttcattcatcacgggctcatggatctgagagtgtggaagatgatgatgat
gatattgtcaatgtatggaatttacgcaaatgcagtgcagcagctctcgatatcctgtca
aatgtgtttggagatgagattctcccaacgctgatgctctttgttcagaccaagttggcc
accagtgaggatgaaacctggaaagaaagggaagctgctgttttggcacttggtgccata
gctgaaggatgcattactggtctttatcctcatttgactgagattgttgcatttctaatc
cctcttttagacgataagtttccacttatacggagtatttcttgttggactctttctcgt
ttcagcaagttcattgttcagggtgtcgaacatcaagtaggttatgagcaatttgacaag
gttcttgtgggtctattaagaagaatattagataataacaagcgggtacaagaggctgct
tgctctgcttttgcgacacttgaagagctgcaggaggcagcagaagagttggcaccacgc
ttggaaatgattttacaacaccttatgtgtgcttttgggaaatatcagaggcggaatctc
aggattgtatatgatgctataggaactctagcagatgctgttggtggggagttgaataag
cccgcgtatcttgaaattctgatgccaccattaattgcaaagtggcaacaacttttaaat
tcagataaagatctctttccattgctagagtgctttacttctatatcacaggctttaggt
gctggattctctcaatttgctgagcctgtatttcagaggtgcataagcatcatccagtcc
caactactcgcgaaggctgatcctgtttcttccggggtcccatatgataaagaatttatt
gtatgctctcttgatctgctctctggacttgctgaaggtcttggcagcgggatagagagc
ttggtttcacagagcaatttgagggacctgcttttgcaatgttgcacggatgatgctccg
gatgtccgacagagtggttttgcactacttggggatcttgcaagagtatgcgcagttcat
ttgcgacctcgtttgccagaatttattgatgtggcagccaagcaactgaatactccaaag
ctgaaggaaactgtttcagttgcaaataatgcatgttgggccattggagagttagcagtg
aaggttcgtcaagaaatttctccaattgttttgacggttatctcttgcttagtccccatc
cttcaacacgcagaggagctcaacaacaagtcactaattgaaaacagtgctatcacactt
gggaggcttgcgtgggtctgtccagagcttgtggctccgcatatggagcattttatgcaa
tcttggtgcattgctttgtcaatgatacgtgatgattttgaaaaggaggatgccttccga
ggtctctgtgctttggttagagccaatccatctggagcattgagttcgctcatttatctg
tgcaacgctattgcaagttggcatgaaataaggagtgaagagcttcataatgaagtttgc
caggtgttgcatggttataagcagatgcttgtgaatggagcatgggaccagtgtatgtct
gctttggagccaccagtgaaggacaagctgtcaaaatacagggtgtaa
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