Pseudomonas putida F1: Pput_0991
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Entry
Pput_0991 CDS
T00537
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
ppf
Pseudomonas putida F1
Pathway
ppf02020
Two-component system
ppf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pput_0991
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pput_0991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppf03021
]
Pput_0991
Transcription machinery [BR:
ppf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pput_0991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
TrmO_C
Motif
Other DBs
NCBI-ProteinID:
ABQ77152
UniProt:
A5VZ42
LinkDB
All DBs
Position
complement(1119150..1120643)
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AA seq
497 aa
AA seq
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MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGEDFDNSD
PMADNAENKPAAEVQDNSFQESTVSADNLEDGEWSERIPNELPVDTAWEDIYQTSASSLP
SNDDDEWDFTTRTSAGESLQSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDTLEEI
CAGFDPELDIELDEVEAVLHRIQQFEPAGVGARNLGECLLLQLRQLPATTPWMTEAKRLV
TDFIDLLGSRDYSQLMRRMKIKEDELRQVIELVQSLNPRPGSQIESSEPEYVVPDVIVRK
DSDRWLVELNQEAIPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLDHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELK
YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctcgtcctaaaaatgggccagcaactgacgatgacacctcagttgcaa
caggccatccgcctgctccagctctctaccctggacctccaacaggaaatccaggaagcg
ctggagtcgaacccgatgctcgaacgtcaggaagacggcgaagacttcgacaacagcgac
ccgatggccgacaacgccgagaacaagccggccgccgaagttcaggacaacagtttccag
gaaagcaccgtcagcgccgacaacctggaagacggtgagtggagcgagcgcatccccaac
gagctcccggttgatacggcctgggaagacatctaccagaccagcgccagcagcctgccg
agcaacgatgatgacgaatgggacttcaccacgcgcacatcggccggcgaaagcctgcaa
agccacctgctgtggcagttgaacctggcgccgatgtccgacaccgaccgcttgattgcc
gtgaccctgatcgacagcatcaacggccagggctacctggaagacacactcgaagaaatc
tgcgccggtttcgacccggagctggatatcgagctggacgaggtcgaagcagtactgcac
cgcatccagcagttcgagccggctggcgtcggcgcccgcaacctgggcgaatgcctgttg
ctgcaactgcgccagctgcccgctacaacgccgtggatgaccgaagccaagcgcctggtt
accgatttcatcgacctgctcggcagccgtgactacagccagctgatgcggcggatgaaa
atcaaggaagacgagctgcgccaggtcatcgaactggtgcaaagccttaacccgcgccct
ggttcgcagatcgagtccagcgagcccgagtacgtggtgcccgacgtcatcgtgcgcaag
gacagcgaccgttggctggtagaactgaaccaggaagccatcccacgcctgcgcgtcaac
ccacaatacgccggcttcgtgcgccgtgccgacaccagcgccgacaacaccttcatgcgc
aaccagctgcaggaagcgcgctggttcatcaagagcctgcagagccgtaacgaaaccctg
atgaaggttgccacgcagatcgtcgagcaccagcgcggcttcctcgaccacggcgacgaa
gcgatgaagccgttggtactgcatgacattgccgaagccgtaggcatgcacgaatcgacc
atctcgcgggttaccacgcagaaatacatgcacaccccgcgtggcatctacgaactgaaa
tactttttctccagccatgtcagcacctccgaaggcggagaatgctcgtccacggcgatc
cgcgcgatcatcaagaaactggttgcggcggaaaatcagaaaaagccattgagtgacagc
aagatcgctggtttactggaggcacaaggcatccaggtagcccgtcgcaccgtcgccaag
taccgcgagtccctcggcatcgcaccgtcgagcgaacgcaagcgactgatgtag
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