KEGG   Pelodictyon phaeoclathratiforme: Ppha_1207
Entry
Ppha_1207         CDS       T00731                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pph  Pelodictyon phaeoclathratiforme
Pathway
pph02020  Two-component system
pph02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pph00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Ppha_1207
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Ppha_1207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pph03021]
    Ppha_1207
Transcription machinery [BR:pph03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Ppha_1207
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ACF43479
UniProt: B4SGR6
LinkDB
Position
1261735..1263183
AA seq 482 aa
MADIRLQQRQSLQLSAQQILSSQLLQLPMLNLEQRIYEELQENPLLEVVEESKESVGEVV
AGSDGSNGDDMFDAVERFSKSALKERSDAPFSVEDSEGRLNFTYEGGSKERFFQAVQHDS
FHDTLLRQLTLHEEVGEREARIAAEILGNLDGDGYFGEDYGVIVDSLHFDGLDISQREVE
EVVRKIHFLDPPGIAVKDLRERFLVQLQAGSERYPSKTYEVATRILRDHFDDFLHRRFEL
LLKKLAETKEGVEAAVSAIIRLDPHPGIFQDEGGYITPDFLVSYENGALIAVLNDRSALS
VKVTDRYQELLKNRKAPKEEKQFIRKNILRANEFTSAIETRRQTLLKVIEALMKRQYGFF
VFGPERVVPLGMKTIAADTDLDISTISRAVNGKYVQTRFGVFELKYFFSTGLSTGEGEDL
SSKVIRQQIADMISGEDSANPLSDESITEMLMKCGIHIARRTVAKYREQMQIPVARLRKK
IF
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggctgatatccggcttcaacaaagacaatcattacagctctctgcacagcagatttta
agcagtcagctccttcagcttccgatgctcaaccttgaacagcgtatttatgaggagtta
caggaaaatccgttacttgaagtagttgaagaaagtaaggagagtgtcggtgaagtcgtt
gcaggcagtgacgggtcgaatggtgacgatatgttcgatgcggttgaacgcttcagtaaa
agtgcactcaaggagcgctccgatgcgccattttctgtcgaagattctgaaggaaggctc
aacttcacctatgaaggcggctcaaaggagaggttctttcaggccgttcagcatgacagt
ttccatgataccctgctccggcagttaacattacatgaagaggtcggggagcgggaggca
aggattgcggccgagattcttggtaatcttgacggcgacggttattttggcgaggactat
ggagtgattgttgacagtctgcactttgatggccttgatatcagccagagggaagtcgag
gaagttgtgcgcaaaattcattttcttgatcctcctggtattgccgtcaaagatttgcgt
gagcggtttcttgttcaactgcaggccggttcggagcgttatccatcaaagacgtatgag
gttgcgacacggattcttcgtgatcattttgatgattttctgcacaggcgctttgaactg
ttgctgaaaaaacttgctgagacaaaagagggcgttgaagcggctgtttcggccatcatc
cggcttgatcctcatcccggcatttttcaggatgagggtggatatattacgccggacttt
cttgtgagctatgagaatggtgcattgattgcagtgctcaatgacagaagcgcactttct
gtcaaggttaccgaccgttatcaggaacttctgaaaaacaggaaagctccaaaagaagaa
aagcagtttatacggaaaaatattctgcgggccaatgagtttacaagcgccattgagacc
aggcgccagacgctgctgaaggtgattgaagcgttgatgaaacggcaatatggctttttt
gtttttggccccgaacgtgtggtgccacttggcatgaaaactattgctgccgataccgat
cttgatatatcgacgatcagtcgggccgtcaatggaaaatatgtacagacccgctttggc
gtttttgagctgaaatattttttcagcacaggactttcgaccggggagggtgaagatctg
tcaagcaaggttattcgtcagcaaattgctgatatgatcagcggggaggattccgcaaat
cccctgagtgatgagagtataacggagatgcttatgaaatgtggaatacatattgcaaga
agaacggttgcaaaatatcgggaacaaatgcagattccagttgcaagattaagaaaaaaa
atattttga

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