Phocoena phocoena (harbor porpoise): 136121101
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Entry
136121101 CDS
T11058
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136121101 (CDX1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
136121101 (CDX1)
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
136121101
NCBI-ProteinID:
XP_065730976
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All DBs
Position
3:127045273..127061113
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AA seq
261 aa
AA seq
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MYVGYVLDKESPVYPGPARPASLGLGPQAYGPPPPPQYPDFTGYSHVEPGPVPPAAWSTP
FSAPKDEWAAAYSPGPAASTASPAPLAFGPPPDFSAVPAPPGPGPGLLAQPLSGPGTPSS
PGAQRRTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRK
SELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQPSQPPPPAHDVTATPAGPPLAGLC
PSSASLLGTSSPMPVKEEYLP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctatgtgctggacaaggaatcccccgtgtaccccggccccgccaggccc
gccagtctcggcctgggcccgcaagcctacggtcccccgccgcctccgcagtaccccgac
ttcaccggctactctcacgtggagccgggccccgtgccccctgcggcctggagcacgccc
ttctctgcgcccaaggacgaatgggccgccgcctacagtccgggccccgcggcctccacc
gccagcccggccccgctggcattcgggccccctccggactttagcgcggtgcccgcgccc
ccggggcctgggccgggtctcctggcgcagcccctcagcggcccaggcacaccgtcctcg
cccggagcgcaaaggcggacgccctacgagtggatgcggcgcagcgtggcggccggaggc
ggcggtggcagcggtaagacccggaccaaggacaaataccgcgtggtctacaccgaccac
cagcgcctggagctggagaaggaattccactacagccgttacatcaccatacggcggaag
tcagagctggccgccaatctgggactcactgaacgtcaggtaaagatctggttccaaaac
cggcgggcaaaggagcgcaaagtgaacaagaagaagcaacagcagcagccttcacagcca
cccccgcccgcccacgatgtcaccgccactccagctgggccacccctggcgggcctgtgc
cccagctctgccagcctcctgggcacctcctccccaatgcctgtcaaggaggagtaccta
ccgtag
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integrated database retrieval system
