Phocoena phocoena (harbor porpoise): 136126683
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Entry
136126683 CDS
T11058
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136126683 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136126683 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136126683 (NUP160)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136126683 (NUP160)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136126683 (NUP160)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136126683 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
136126683
NCBI-ProteinID:
XP_065738099
LinkDB
All DBs
Position
8:complement(97466147..97517698)
Genome browser
AA seq
1402 aa
AA seq
DB search
MATAGAVERSFVELSGAERERPRHFREFTVCGIGTANVVAGAVKYGESAGGFCYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCILLPGGVHVSETQNHVIIL
ILTNQTVHRLLLPHPSRMYRSELVIESQMQSIFTDIGKVDFRDPCNYQLIPTVPGLSPNS
TTSAAWLSNDGEALFAVPSASGGIFVLKLPPHDVPGMVSVVELKQSSVMQRLLIGWMPTV
IRGDQGPSDRPLSLAVHCVKNDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRFAYSPTLGVCLGIYMHAPKRGQFCIFQLVSVENNRYSIDHISSLFTSQE
TLIDFALTSTDIWVLWHDAENQTVVKYINFEHNVTGQWNPVFMQPLPEEEIIIRDDQDPR
EMYLQSLFTPGRFVNAALCKALQIFCRGTDRNLDLSWNELKKEVTLAVESELQGSVTEYE
FSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHVNPHTNMVCLLKKGYLSFLVPSSFV
DHLYLLPDENLLTEDETIISDDVDVARDVVCLIKCLRLIGESVTMDMSVMMEMSCYNLQS
PEKAAEQILEDLIAIDVDSVMEDICSKLQEIRNPTHAIGLLIREMDYETEVEMEKGFDPA
QPLNIRMNLSQVYGSSTAGRIVCRSVCKIASTRFLICRDLLILQQLLTRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSGALMANK
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTELNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSHAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTYNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPTNRQ
IEILELEDLEKECSLARIRLTLAQHDPSAVAVAGSSSAEEMVTLLVQAGLFDTAIALCQT
FKLPLMPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLEKYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILD
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgggagccgtggaacggagcttcgtggagctcagcggagctgagcgcgaa
aggccgaggcactttcgggagttcacagtttgcggcattggaactgcaaatgtcgtggcc
ggagccgtgaaatacggtgagagcgcgggaggcttctgttatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagacctctggagatacattggagctg
gtggaagagtcactggacataaatctgttaaataatgcagttcgcctcaaattccaaaat
tgcatcctcttacccggaggggttcatgtctctgagactcagaatcatgtgataatcttg
atattaaccaatcaaacagtgcacaggttacttttaccacacccttcccggatgtatagg
agtgagttggtaattgaaagtcagatgcagtcaatattcactgacattggaaaagttgac
ttcagggatccttgcaactatcagttaattccaacagtacctggactctcccctaattct
accacctcggcagcctggcttagcaatgacggggaggctctgtttgctgtaccatctgcc
tctgggggaatctttgttcttaaactacctcctcatgatgtacctgggatggtgtcagtt
gtggagctgaaacagagttcagtaatgcaacgattgcttataggctggatgccaacagtt
atcagaggtgatcaggggccttcagatcgtcccctgagtcttgctgttcattgtgtcaag
aacgatgccttcatctttgctctatgtcaggatcataaactacgaatgtggtcttataag
gagcaaatgtgcctgatggtagctgacatgctagagtatgtccctgtgaataaagatctt
cggctcactgctgggactggacacaaattacgatttgcctattcccctaccctgggagtc
tgcctagggatatacatgcatgcaccaaagcgaggacagttctgcattttccagttggta
agcgttgagaataaccgctacagcatagatcacatttcctcactattcacttctcaggag
acactgattgactttgccttaacctctacggatatctgggtcttgtggcatgatgctgag
aaccaaacagttgtgaaatatatcaactttgaacataatgttacaggtcagtggaatcca
gtttttatgcagcctctgccagaggaagaaatcattatcagagatgatcaagaccccaga
gagatgtatttgcagagtctttttacaccagggcgattcgttaatgcagctttatgtaaa
gctttacagattttctgtcgaggaactgacaggaatttagatctctcctggaatgaacta
aagaaagaagttactttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaa
ttttcccaggaagagttccgaaatttacaacaggaattttggtgcaagttctatgcctgc
tgtcttcagtatcaagaagccctttctcatcctcttgccctacatgtgaatccacacaca
aacatggtgtgcctgctgaaaaaagggtacctgtctttccttgtgccttcctcctttgtg
gatcatttatatctcctacctgatgagaatcttttgacagaggatgagacaatcatatct
gatgatgtggatgttgctcgggatgtcgtatgtctcataaaatgccttcggctgattgga
gagtcagtaactatggatatgtcagtaatgatggaaatgagttgttacaacctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcgctattgatgtagacagtgtg
atggaggatatttgtagtaaactgcaagagattaggaacccaacccatgccattggactt
cttatacgggaaatggattatgaaacagaagtggaaatggaaaagggattcgatccagct
cagcctttgaatattcgaatgaatctttcccaggtctatggtagtagcacagcggggcgt
attgtgtgcagaagtgtgtgtaaaattgccagtactcgcttcctcatctgccgagacctc
ttgatcttacagcagctactaacgaggctaggagatgcagtgattttgggagctggtcag
ctctttcaagctcagcaagacctactacatcgaacagctcccctactcttatcttattac
ctcattaaatggggaagtcagtgcttggcaactgatgttccagttgacacactggagtct
aatcttcaacatttatcagtactggaactaactgactctggtgctttaatggcaaataag
ttcgtatctagccctcagacaattgtggagttattcttccaagaagttgcaagaaaacac
attatatctcatttgttctctcaaccaaaggcacctctaagccagactgagttgaactgg
cctgagatgattactgcaattaccagttatttattgcagcttttatggcctagcaatcct
ggttgcctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcaactgctacatccctggtgtcaagtcaatgttggttcctgtcgatttatgctggga
cggtgttacctggttacaggagagggacagaaggctctggaatgtttctgccaggcagca
tctgaagtgggcaaagaggaattcttagatcgcttgatccgttcagaggatggggagatt
gtgtccacccccaggctgcagtattatgataaggttttgcgtctgctcgatgtcgttggg
ttgcctgaactggttattcagttggctacatcagcaataactgaagcaggtgatgactgg
aaaagtcaggctactttaaggacatgcattttcaaacatcatttggatttaggtcacaat
agccacgcatatgaagccttaacccaaattcctgattccagcagacagttagattgttta
cggcagctggtggtagttctttgtgaacgctcacagctacaggatctcgtagagtttccc
tatgtgaatctgcataatgaggttgtgggaataattgaatcacgtgcgagagctgtggac
cttatgacttacaattactatgagcttctgtatgccttccacatctatcgtcacaattac
cggaaggctggcacagtgatgtttgagtacggaatgcgtcttggcagagaggttcgaact
ctccggggacttgagaagcaaggcaactgttatctggctgctattaattgtttacgcctt
attcgcccagaatacgcatggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgccccaacaaatagacag
attgaaatcctggaactagaagatctggagaaagagtgttccttggctcgcattcgcctc
actctagctcagcacgatccctcagcagtcgcggttgcaggaagttcgtcagcagaggag
atggtcactctcttggttcaggctggcctctttgacactgccatagcactctgccagact
tttaagcttcccttaatgccagtctttgagggacttgctttcaaatgcatcaaattgcag
tttggaggagaggcagcccaagcagaagcctgggcctggctagcagccaatcagctctca
tcagtcatcaccactaaggagtctagtgctacagatgaagcatggaggctattatcaact
tacctggaaaagtacaaagtccagaataacttatatcaccactgtgtaatcaacaagctc
ttgtctcatggagtgcctctgcctaactggcttataaacagttataagaaggttgatgct
gctgagttgctccgtctctacttaaactatgaccttttagaagaagctgtggatttggtt
tcagaatatgtggatgctgtattgggaaaaggacatcagtactttggaattgagtttcca
ctgtctgcaacagctccaatggtgtggctcccatactcttccattgatcagcttctccag
gctctgggagagaacagtgccaacagtcacaacattgcactgtcccagaaaatacttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcgg
aacttgtga
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integrated database retrieval system
