Phocoena phocoena (harbor porpoise): 136134623
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Entry
136134623 CDS
T11058
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136134623 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136134623 (CRNKL1)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136134623 (CRNKL1)
Spliceosome [BR:
pphc03041
]
Complex B
Other components
Prp19-related factors
136134623 (CRNKL1)
Complex C
136134623 (CRNKL1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
136134623 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
Mad3_BUB1_I
TPR_17
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
136134623
NCBI-ProteinID:
XP_065748349
LinkDB
All DBs
Position
15:complement(40948131..40970587)
Genome browser
AA seq
693 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNMAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHGYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANV
PPVQEKRHWKRYIYLWINYALYEELEAKDAERTRQVYQASLELIPHKKFTFAKMWLLYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRR
LLQRTQHVKVWISFAQFELSSGKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRSF
EDEFGTVSDKERVDQLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEPGEEDPDVDAAEQESGPSCSC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaccgcggccgggaagcagaggatccccaaagtggcaaaggtgaaaaac
aaagccccagctgaggtgcagataactgcagagcagctgctaagagaagctaaggaaaga
gaacttgagcttcttccacctccccctcaacagaagatcacagatgaagaagagttaaat
gattacaaactgaggaagaggaagacttttgaagataacataagaaaaaacaggactgtg
attagtaactggataaaatatgcacaatgggaagagagtctaaaggagattcaaagggct
cgatccatatacgaacgtgctttggatgtggactatcgaaatattacactctggctgaaa
tatgcagaaatggaaatgaagaatcgccaggtcaaccatgcccgaaatatctgggaccgg
gccataacgactctgcctcgcgtcaaccagttctggtacaagtacacgtacatggaggag
atgctggggaacatggcgggtgcccggcaggtgttcgagcgctggatggagtggcagcca
gaggagcaggcctggcactcctacatcaacttcgagctgagatacaaagaggtggatcgg
gcccgcaccatttacgaacgctttgttcttgtgcaccctgatgtgaagaactggatcaag
tacgcccgctttgaagaaaagcacggttactttgcccatgcgcggaaggtgtatgagaga
gctgtcgaattctttggggatgaacatatggatgaacacctttatgttgcctttgccaaa
tttgaggaaaatcagaaagaatttgagagggtacgagtgatctataagtacgccctggat
cgaatctcaaagcaggaagcccaggaactctttaaaaattacaccatctttgagaagaag
tttggtgacaggcggggcattgaagacatcatcgtgagcaaacggaggttccagtacgag
gaggaggtgaaggctaacccgcacaactacgatgcatggttcgattacttgcgcttggtc
gaaagcgacgcagaggcagagacagtgcgggaagtctacgagcgagccatcgccaacgtg
ccgcctgtgcaggagaagaggcactggaagcgctacatctacctgtggatcaactacgcc
ctctacgaggagctggaggcgaaggatgcggagaggacaagacaagtttaccaagcctct
ttggaactcattcctcataaaaagttcacatttgccaaaatgtggttactgtatgcacag
tttgaaataagacagaaaaatttaccatttgccagaagagctttgggaacttccataggc
aagtgtccgaagaacaagttatttaaaggttacatagaactggagctacagcttcgagaa
tttgacagatgccggaagctttatgaaaagttcctggaatttgggcctgaaaattgtacc
tcttggattaaatttgcagaattagagacaatccttggcgatatcgagagagcccgggcc
atctacgagttagccatcagtcagccacgcttggacatgccggaggtgctttggaaatca
tatattgattttgaaattgagcaggaagaaactgaaagaacacgaaatctttaccgacga
ttgcttcaacggacacaacatgtcaaggtatggatcagttttgcacagtttgagttgtcc
tcagggaaggaaggaagtttggctaaatgcagacaaatttatgaagaggctaacaaaacc
atgcgaaactgtgaagaaaaggaagagagacttatgttgctggaatcttggcgaagcttt
gaagatgaatttggaacagtatcagataaggagagagtagaccaactcatgccagagaaa
gtcaagaagagaagaaaggtccaagctgatgatgggtcggatgcaggctgggaagaatac
tatgattacatctttccggaagatgctgccaaccagcccaacctcaagctcctggccatg
gccaaactgtggaagaaacagcagcaggagaaggagcctggcgaggaagacccagatgtg
gacgctgccgagcaggagtccgggccttcctgttcctgttga
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