Phocoena phocoena (harbor porpoise): 136135389
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Entry
136135389 CDS
T11058
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1-like
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04148
Efferocytosis
pphc04380
Osteoclast differentiation
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136135389
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
136135389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136135389
04090 CD molecules [BR:
pphc04090
]
136135389
Cell adhesion molecules [BR:
pphc04515
]
Immunoglobulin superfamily
SIRP family
136135389
CD molecules [BR:
pphc04090
]
Proteins
136135389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
V-set
Ig_3
C2-set_2
ig
Ig_2
I-set
C2-set_3
SIT
TMEM154
Lmo2446-like_N
ICAM1_3_5_D2
Insulin_TMD
MFS_1
Ly49
Motif
Other DBs
NCBI-GeneID:
136135389
NCBI-ProteinID:
XP_065749342
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All DBs
Position
15:complement(59447781..59487311)
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AA seq
504 aa
AA seq
DB search
MEPSRPAPGRLRPLLCLLLAASSAWSGVAGEDELQVIQPDRSVSVAAGETATLRCDVTSL
LPVGPVNWFRGTGPHRQLIYSLKNSPFPRVTTVADTTRRNNMDFSIRISNITPADTGMYY
CVKFKKASPDVEIKSGPGTHLTVSAKPSPPVVSGPTVRVAPEQTVSFTCKSHGFSPRNIS
LKWFKNGNELSASQTDVEPEGNNVSYSISSTTKVVLAPGDVRSQVICEVTHITLQGDPPL
RGTANLSETIRVPPTLTITQHPRVGNQVNVTCQVNKFYPQRLQLTWLENGNVSRMDMAST
LIENKDGTFNRTSSLLVNSSAHREAVLLTCQVEHDGQPAVTKNHTLEASAPQKNQDADQR
IDKADNWNSIFIVVGIVCALLVALMIAALYLLRIRQKKAKGSTSSTRLHEPEKNTRETTQ
IQDNNDITYADLNLPKGKKSTPKADEPNNHTEYASIQACPPPVSEDTLTYADLDMVHLNR
NPKQPAPKPEPSYSEYASVQVQRK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggagccctcccgcccggcccccggccgcctcaggccgctgctctgcctgctgctcgct
gcgtccagcgcctggtcaggagtggcaggtgaggacgagctgcaggtgattcagcctgac
aggtcagtttcagttgcagcaggagagacggccactctgcgctgcgacgtgacctccctg
ctccccgtggggcccgtcaattggttcaggggcacagggccacaccgacagttaatctac
agtctcaaaaatagccccttccctcgagtaacaactgttgcagatactacaaggagaaac
aacatggacttttccatccgcatcagtaacatcacgccagcagacaccggtatgtactac
tgtgtgaagttcaagaaagcaagccctgacgtggagattaagtctggaccaggcactcat
ctcactgtgagtgccaaaccctctcctcctgtggtatcaggccccacagtgagggtcgca
cctgagcagacagtgagcttcacctgcaaatcccacgggttctcccccagaaacatctcc
ctgaaatggttcaaaaatggcaatgagctctcagcctcccagaccgacgtggaaccagag
ggaaacaacgtttcctacagcatctccagcacaaccaaggtggtgctggccccgggggat
gttcgctcccaggtcatctgcgaggtgacccacatcaccctgcagggagaccctcctctt
cgtgggacagccaacttgtctgagaccatccgagttccgcctaccttgacgattacccaa
caccccagggtggggaaccaggtgaatgtcacctgccaggtgaacaagttctacccccag
cgcctacagctgacctggttggagaacggaaatgtgtcccgaatggacatggcctcgacc
ctcatagagaacaaggacgggacctttaaccggacgagctcgctcctggtgaactcatct
gcccacagggaggctgtgctgctcacctgccaggtggagcatgacggacagccggcggtc
accaaaaaccacaccctggaggcctctgctccccagaagaaccaggatgcagatcaacgt
attgacaaggctgacaactggaacagtatcttcatcgtggtgggcatagtgtgtgccctg
ctggtggccctgatgatcgccgccctctacctcctccgaatcagacagaagaaagccaag
ggctccacttcttctacaaggttgcatgagcccgagaagaacactagagaaacaacccag
atccaggacaacaacgacatcacatatgcagacctgaacctgcccaaggggaagaagtcc
acccccaaggccgacgaacccaacaaccacacggagtatgccagcattcaggcctgccca
ccacctgtgtccgaggacaccctcacctacgccgacctggacatggtccacctcaaccgg
aaccccaagcagccagcccccaagcctgagccatcctactcagagtatgccagtgtccag
gtccagaggaagtga
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