Phocoena phocoena (harbor porpoise): 136142940
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Entry
136142940 CDS
T11058
Symbol
RBMX
Name
(RefSeq) RNA-binding motif protein, X chromosome
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136142940 (RBMX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136142940 (RBMX)
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136142940 (RBMX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_5
RRM_occluded
PHM7_cyt
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
136142940
NCBI-ProteinID:
XP_065757308
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All DBs
Position
X:complement(115061304..115066998)
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AA seq
391 aa
AA seq
DB search
MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTR
GPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGR
APVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRD
YTYRDYGHSSSRDDYPSRGYSDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGP
PPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPP
RDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagcagatcgcccaggaaagctcttcatcggtggcctcaatacagaaacaaat
gagaaagctcttgaagcagtatttggcaaatatggacgaatagtggaagttctcttgatg
aaagatcgtgaaaccaacaaatctagaggatttgcttttgtcacctttgaaagcccagca
gatgctaaggatgcagcgagagacatgaatggaaagtccttagatggaaaagccatcaag
gtagaacaagccactaaaccatcatttgaaagtggtagacgtggaccacctccacctcca
agaagcagaggccctccaagaggccttcgaggcggaagaggaggaagtggaggaaccagg
ggacctccctcacgtggagggcacatggacgacggtggttattccatgaattttaacatg
agttcttccaggggaccacttccagtaaaaagaggaccaccgccacgaagtgggggtcct
cctcctaaaagatctgccccttcaggaccagttcgcagcagcagtggaatgggaggaaga
gctcctgtatcacgtggaagagatagttatggaggtccacctcgaagggaacccctgccc
tctcgtagagatgtttatttgtccccaagagatgatggatattctactaaagacagctat
tcaagcagagattacccaagttctcgtgatacaagagattatgcaccaccaccaagagat
tatacttaccgtgattatggtcattccagttcacgtgatgactatccatcaagaggctat
agtgatagagatggctatggtcgtgatcgtgactattcagatcatccaagtggaggttcc
tacagagattcatatgagagttatggtaactcacgtagtgctccacctacacgagggccc
ccgccatcttatggtggaagcagtcgctatgatgattacagcagctcacgtgacggatat
ggtggaagtcgagacagttactcaagcagccgaagtgatctctactcaagtggtcgtgat
cgggttggcagacaagaaagagggcttcccccttctatggaaagggggtaccctcctcca
cgagattcctacagcagttcaagccgcggagcaccaagaggtggtggccgtggaggaagc
cgatctgatagagggggaggcagaagcagatattaa
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