KEGG   Pannonibacter phragmitetus: APZ00_20150
Entry
APZ00_20150       CDS       T04214                                 
Name
(GenBank) type I-C CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
pphr  Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pphr03400]
    APZ00_20150
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pphr02048]
    APZ00_20150
DNA repair and recombination proteins [BR:pphr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     APZ00_20150
Prokaryotic defense system [BR:pphr02048]
 CRISPR-Cas system
  Universal Cas proteins
   APZ00_20150
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: ALV29068
UniProt: A0A0U3PNI0
LinkDB
Position
complement(4418855..4419886)
AA seq 343 aa
MKKLLNTVYVTTEGAVLRKDGDNLVAEVDGAERARVPLHMLGAVVVFGPVLVSPALIGAC
AAAGITLVLLERNGRFQARIEGPVAGNVLLRRAQYAASEHPDDIVRSMVMGKIANQRSVL
LRHLCDHGADADETARAEMDQATARMARLLQKLEVLSGLDSLRGAEGEAAQLYFGVFNHL
IRSPDPEICFKGRSRRPPLDPVNALLSFLYTLLTHDCRSAAESCGLDPAVGFLHRDRPGR
PSLALDLMEELRPVLADRLALSLFNRRQLRAKDFEQRDGGAVLLTDDARKLVLTAWQERK
REERQHPFLDEKASLGLVPYLQAQLLSRHLRGDLEAYPPWFWK
NT seq 1032 nt   +upstreamnt  +downstreamnt
ctgaagaagcttctcaacaccgtctatgtcaccacggaaggcgcggtgctgcgcaaggac
ggcgacaatctcgtcgccgaggtcgacggggccgagcgcgcccgtgtgccgttgcacatg
ttgggggccgtcgtggtcttcggtccggttcttgtctcgccagccttgatcggggcctgc
gccgctgccgggatcacgcttgtgctgctggagcgcaacggccgctttcaggcgcgcata
gagggcccggttgcgggcaatgtcctcttgcggcgggcgcaatatgctgcctccgagcac
ccggatgacattgtccgcagcatggtcatgggcaagatcgccaaccagcgcagcgttctc
ttgcgccacctgtgcgatcatggcgccgatgccgatgaaactgccagggcggaaatggac
caggcaaccgcccgcatggcgcggctgttgcagaagctcgaggtgctgtccggtcttgac
agtctgcgcggtgccgagggcgaagcggcacagctctacttcggcgtgttcaatcacctg
atccgctcgcccgaccccgagatctgcttcaagggacgttcccgccgtccgccgctcgat
ccggtgaatgcgcttctgtcgttcctctacactctgctcacccatgattgccgcagtgcg
gcggaaagctgcggccttgatccggcggtcggcttcctccaccgtgaccgccccggccgt
ccgagccttgcccttgatctgatggaggaactgcgtcccgttctggctgaccggctggcc
ctgtcgcttttcaaccgccgtcagctgagggcaaaggactttgaacagcgcgacggtggt
gcggtgctcctcaccgatgatgcgcgcaagctcgtcctcaccgcgtggcaggagcgcaaa
cgtgaagagcgtcagcatcctttcctggacgaaaaggcatcgctcgggctcgtgccttac
ctgcaggcacaacttctgtcccggcacctgcgcggcgatcttgaggcctatcccccatgg
ttctggaagtaa

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