Pannonibacter phragmitetus: APZ00_20795
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Entry
APZ00_20795 CDS
T04214
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03030
DNA replication
pphr03430
Mismatch repair
pphr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ00_20795
03430 Mismatch repair
APZ00_20795
03440 Homologous recombination
APZ00_20795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphr03032
]
APZ00_20795
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_20795
Enzymes [BR:
pphr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ00_20795
DNA replication proteins [BR:
pphr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APZ00_20795
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APZ00_20795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF294
DUF294_C
RNase_T
CBS
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ALV29182
UniProt:
A0A0U3FSB7
LinkDB
All DBs
Position
4569637..4571784
Genome browser
AA seq
715 aa
AA seq
DB search
MKQPVSPVTPLIALNTVVLDTETTGLDVRSDRVVQIGAVRLYGQEIQDEAVFNVIVDPHM
PIPEVARRIHGLSDADVSGKPGIAEVLPQLAAFIGDAVVVGHSIHFDLAILRHEAERHGV
KWTEPKALDVALIVAGLDRALIDTSLDSLALSLGIAIEGRHTALGDAMATARVYAGLQNR
LLASGIRTLAEAENLCRKPQSLIARQEEAGWFDRPREQHDFSRLALKQGTQRAIDSYLYR
NRLGDVMSSPPISISETADLHSAAQLMAACHIGCLIVTREGGEPGILSERDVLHALAARG
AEAGKLKVGALMSFPVISAPADTFLYRALGLMARKNLRYLGVSDDGGRLAGIFTLRTLLR
ERALATLTVGDEIAMAGRPRDLAKVQSALPTLATGLLADGQDARQVCAIISAENKAMTAR
AAEIAEAELEAAGAGPAPAAYAVLMLGSGGRGESMLAPDQDNALLIADDYTGDLTSPDDW
FFRFATRLNEILDRAGIPYCKGGVMARNSQWRRRLGEWQHQVEEWAHHPSPQALLNVDIF
YDFTPAHVSGSTGARLAETLRHFAADTARGSLALVRALGETAASHAPPLGLFGRIRKDDQ
GRVDLKSGGLLPIVAGARAIALRHGVTALSTPERILQAAHHAGRSQADAEILANIHGFLI
RLILTQQINDLEAGIAPCNRVEVARLNHRDQDELREALGRIDLITHMLRDLLQGI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagcccgtcagcccggtcacgccgctcatcgcactcaacaccgtggtcctcgac
accgagaccacggggctggatgtgcgttccgaccgggtggtgcagatcggggctgtccgg
ctctacggccaggagatccaggacgaggcggtcttcaacgtcatcgttgacccgcatatg
ccgatcccggaggtcgcccggcgcatccatggcctgtctgatgcggatgtgtccggaaag
ccgggcattgccgaggttctgccgcaactggccgccttcatcggcgatgcggtggtggtg
ggccattccatccatttcgaccttgccatcctgcgccacgaggcggaacggcacggggta
aaatggacagagcccaaggcgctcgatgtggcgctgatcgtcgccggcctcgaccgcgcc
ctgatcgacacttcgctggacagccttgccctcagtctcggcattgccattgagggccgc
cacacggcgctgggcgatgcgatggcgacagcccgcgtctatgctggcctgcagaaccgg
ctgctggccagcggcatccgcacgctggcggaggccgaaaacctctgccgcaagccgcaa
agcctgattgcccgccaggaggaagccggctggttcgaccggccgcgcgaacagcacgac
ttctcccgcctcgccctgaagcagggcacccagcgggccatcgacagctatctttaccgc
aaccggctgggcgacgtgatgagcagcccgccgatttcgatcagcgagaccgccgatctg
cacagtgccgcccagctgatggcggcctgccacattggctgcctgatcgtgacgcgggag
ggcggagagccgggcatcctgagcgaacgcgacgtgctgcatgcgctggcggcgcgcggt
gcggaagcgggcaagctgaaggttggcgccctgatgagctttccggtgatcagcgccccg
gcagacacctttctctaccgcgccctcgggctgatggcccgcaagaacctgcgctatcta
ggggtgagcgatgacggcggacgtctggccggcattttcaccttgcgcacgctcctgcgc
gagcgggcgctggcaacactcaccgtgggcgacgagatcgccatggccgggcgcccgcgc
gatcttgccaaggtgcaatccgccctgcccactctggcaaccgggcttctcgccgacggg
caggatgcgcggcaggtctgcgccatcatctcggccgagaacaaggccatgaccgcccgc
gccgccgaaatagccgaagccgagctggaggctgccggggcgggccctgcccccgccgcc
tatgcggtgctgatgctgggctccggcggacgcggggaaagcatgctggcccccgatcag
gacaatgccctgctgattgccgatgactacaccggcgacctgacctcgcccgatgactgg
ttcttccgctttgccacacggctgaacgagatccttgaccgggcgggcattccctactgc
aagggcggtgtgatggcgcgcaacagccagtggcgccgccgcctgggagaatggcagcac
caggttgaggaatgggcccatcacccttctccgcaggcgctgctcaatgtggatattttc
tacgacttcacccccgcccatgtgtccggcagcaccggcgcgcggctggcggagaccctg
cgccactttgcggcggataccgcgcgcggctcgcttgcgctggtcagggccctgggcgaa
accgccgcctcgcatgccccgccgctgggcctcttcgggcgcatccgcaaggatgatcag
gggcgggtcgatctcaagtccggcgggcttctacccatcgtcgccggggcccgggcgatt
gcgctgcgccacggggtgacggccctttccacgcccgagcgtatcctgcaggccgcacat
cacgccggacgctcgcaggcggacgcggaaatcctcgccaacatccacggcttcctcatc
cgcctgatcctcacccagcagatcaacgatctggaagcgggcatcgcgccgtgcaaccgg
gtggaagttgcgcggctgaaccaccgggatcaggacgagctgcgcgaagccctcgggcgc
atcgacctcatcacccacatgctgcgcgacctgctgcaggggatctga
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