Candidatus Pelagisphaera phototrophica: GA004_06620
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Entry
GA004_06620 CDS
T09061
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00300
Lysine biosynthesis
ppht00550
Peptidoglycan biosynthesis
ppht01100
Metabolic pathways
ppht01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GA004_06620 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GA004_06620 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GA004_06620 (murF)
Enzymes [BR:
ppht01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
GA004_06620 (murF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QXD33375
LinkDB
All DBs
Position
1504289..1505692
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AA seq
467 aa
AA seq
DB search
MDESEMVGLDGSDLLRWSNGEWLGEPPLKSIKGFAYDTRLLKKGDLFVAFKTNQRDGHDF
LADARAKGAIGAIVQKKMEFSRRFPLLCVDDTLKAFQAIAQGFRETWNFPVVAITGSCGK
TTTKELLCHLLGGFPVAQGTRGNLNNLIGVPSTLLEINSNECRFAVIEAGISERGEMKTL
VDTINPDRVIFTAIGPSHLEGLGSVEGVAREKGILARKARTKTVYLGETCRLYREHLNAE
EGIFVLESESSVGPSGWNYQIENVGSGMRLSFGHRDESYFVEGTGRGLASNAALAIAVSR
SFDVSPESVQERLAKWKPSGMRGEWIEVGESRVYLDCYNANPLSMLDSLNNFRTLAEPAE
NRLYVIGSMEELGSESEEWHKRLGSELCLRPRDRAYLIGKGSDWVLEGIQVSNRSRGHVE
KLESLETLKRVLAEFEGDVFLKGSRKYRLETVMEYLPKIAVDERTPC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaatctgaaatggtaggattggacggaagcgatctcttgagatggagtaacgga
gagtggttgggcgaaccgcctttaaagtccatcaaaggatttgcgtacgatacgagactt
ttgaaaaaaggagatctttttgtagcttttaaaacgaaccaaagagatgggcatgatttt
cttgcagatgcgcgggctaagggtgcaataggggcaatcgttcagaaaaaaatggagttc
agcagacgctttcccttgttgtgcgtagacgacacattaaaggcttttcaggcgattgct
caaggatttcgcgaaacgtggaatttccctgtggtggcgattacgggaagctgtggcaaa
acaactactaaggaactgctttgccatttgctgggaggatttcctgtggcccaaggaacc
agaggcaatctcaacaatttgattggagtgccgtctaccctgcttgaaatcaactcaaat
gaatgtcgctttgccgttattgaggcagggataagcgagcgaggggaaatgaagactctc
gtggatacaatcaatcccgatcgagtgatttttactgcgattgggccttctcatttggag
gggctcggctcagtggaaggtgttgcgagagagaagggtatacttgcgcgtaaggccagg
acgaaaacggtttacctcggagagacctgtcgactgtatcgggaacacttgaatgccgaa
gaaggtattttcgtcttagaatcagaatcgtcagttggcccatcgggatggaattatcaa
atcgagaacgtaggatccggtatgcgattgagttttggacacagggatgaatcctacttt
gtagagggaacaggacgaggattggcatcgaatgccgctctggccattgcggtttctagg
agttttgatgtttctcccgaaagtgtccaggagcgattggcaaaatggaagcctagcggg
atgagaggcgagtggatcgaagtaggggaatcccgagtgtatttggattgctacaacgcc
aatccattgtccatgctcgattccctcaataatttcagaacccttgcggaaccagctgaa
aataggctgtatgtcatcggcagtatggaagaattgggttccgagtcagaagaatggcat
aagcggcttggttccgagctttgcttgagaccgcgtgacagggcctatctaattgggaag
ggatcggactgggttttagagggaattcaagtttccaataggtcgaggggacacgtagaa
aaactcgaaagcctagaaacattgaagcgagttctggcagaatttgaaggagatgtcttt
ttgaaaggaagccgcaaatatcgacttgagacagtgatggagtaccttccaaaaatagct
gtcgatgaaaggactccatgctaa
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