Candidatus Pelagisphaera phototrophica: GA004_07965
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Entry
GA004_07965 CDS
T09061
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00541
Biosynthesis of various nucleotide sugars
ppht01100
Metabolic pathways
ppht01250
Biosynthesis of nucleotide sugars
Module
ppht_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GA004_07965 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppht01005
]
GA004_07965 (kdsB)
Enzymes [BR:
ppht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GA004_07965 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ppht01005
]
Lipid A
GA004_07965 (kdsB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QXD33615
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All DBs
Position
1842369..1843112
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AA seq
247 aa
AA seq
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MLAIIAPARLASTRFPEKLLYPIKGKPLILWVAERLQEQAPEIPRYFAVDDLRLETVLRD
AGHKTITTRDDHTCGTDRLAEANEKIGAEWLINVQGDEPLVTRGQILALESLLKEGAYMA
TLATRFNTRAEFLDPNQVKLVMDTAQNALYFSRASIPHDRDGFEIFDDDWVARAPAYRHI
GLYGYRADFLRTYCSLPEGKLEMVERLEQLRVLENGYDIKVALTDELSIGIDTLNDAALF
EEYLNRI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgattattgctcccgctcgtcttgcctccactaggtttcccgaaaagcttctc
tatccgattaagggtaagccgctcattttgtgggtggcagaacgtttgcaagaacaagcg
ccggaaataccacggtattttgcggtggatgacttgcgactggagacagtattgcgagac
gcggggcataaaactatcacgacgcgtgatgaccacacttgcgggacggaccgtctagct
gaagcgaacgagaaaattggagctgagtggttaatcaatgttcagggggatgaacctcta
gtgactcgagggcaaattctagcactggagtctctgctaaaagagggcgcttatatggcg
actctggcgactcgattcaatacgagggctgagtttctcgatcccaaccaggttaagtta
gtgatggacacggcccaaaacgctttgtatttttcccgagcgtcgattccgcatgaccgg
gatggattcgagatttttgatgatgactgggtggccagggctcccgcctatcggcatata
gggctatacggatatcgagcggattttcttcggacctactgcagtttgccggaaggaaaa
ctggaaatggtagagaggcttgagcaacttcgcgttttggaaaacggctatgacattaag
gtcgctctcacggatgagctatcgattggaatcgacactctcaatgatgcggcactcttc
gaggaatacttgaatcgaatttag
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