Pseudomonas putida ND6: YSA_02198
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Entry
YSA_02198 CDS
T02170
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00521
Streptomycin biosynthesis
ppi00523
Polyketide sugar unit biosynthesis
ppi00525
Acarbose and validamycin biosynthesis
ppi00541
O-Antigen nucleotide sugar biosynthesis
ppi01100
Metabolic pathways
ppi01110
Biosynthesis of secondary metabolites
ppi01250
Biosynthesis of nucleotide sugars
Module
ppi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
YSA_02198
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
YSA_02198
01055 Biosynthesis of vancomycin group antibiotics
YSA_02198
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
YSA_02198
00525 Acarbose and validamycin biosynthesis
YSA_02198
Enzymes [BR:
ppi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
YSA_02198
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AFK67956
UniProt:
I3UR35
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Position
1174296..1175495
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AA seq
399 aa
AA seq
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MTPIPKKPADKPVTPQKEMVVFIASPFIKQRDTMILVTGGAGFIGSNFVHQWCAAHSEPV
LNLDALTYAGNLANLQSLEGNAQHHFVQGNICDASLLAELFAEHRPRAVVHFAAESHVDR
SITGPEAFVETNVMGTFRLLEAARAHWNSLEGAEKEAFRFLHVSTDEVYGTLGPNDPAFT
ETTPYAPNSPYSASKAASDHLVRSYFHTYGMPVLTTNCSNNYGPFHFPEKLIPLMIVNAL
AGKALPVYGDGQQIRDWLYVEDHCSGIRRVLEAGAFGETYNIGGWNEKANIDIVRTLCGL
LDEMAPAASRQVINQKTGKPVEQYAELITYVTDRPGHDRRYAIDARKIERELGWKPAETF
ETGIRKTVAWYLANQEWVKGVMDGSYRDWVVQQYGANKA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctattcctaaaaagcccgctgacaagcctgtaacgccgcaaaaagaaatggta
gtattcatagcttcccctttcatcaaacagagagacactatgattcttgtcacaggcggt
gccggattcatcggttccaactttgttcatcagtggtgtgcagcgcactctgagcccgta
ctgaatctcgacgccctgacctacgcaggcaacctggccaacctgcaatcgctggaaggc
aacgctcagcatcacttcgtccagggcaatatttgcgatgcatcgctgctggccgagctg
ttcgccgagcatcgcccgcgcgccgtggttcactttgcggccgaatcccatgtagaccgc
tcgatcaccggccccgaagcgtttgtcgagaccaacgtgatgggcaccttccgtttgctg
gaagccgcccgggcgcattggaatagcctggagggtgccgagaaagaggcattccgcttc
ctgcacgtttccactgacgaagtctacggcacactcgggccaaacgacccagccttcacc
gaaaccaccccgtacgcgccaaacagcccgtactcggccagcaaggcagccagtgatcac
ttggtacgttcgtacttccatacctacggtatgccggtactcaccaccaactgctccaac
aactacgggccgttccacttcccggaaaaactgatcccgttgatgatcgtcaatgccctc
gcaggcaaggcgctgcctgtttatggcgacggccagcaaattcgcgactggctgtatgta
gaagaccattgctcgggcatccgtcgcgtactggaagccggcgcgttcggcgagacgtac
aatattggcggctggaacgaaaaagccaacattgacatcgtgcgtaccctctgcggcctt
cttgacgaaatggcgcctgctgcgtcgcgccaggtaatcaaccagaaaaccggcaagcca
gtcgagcagtatgccgaactcattacctatgtcaccgaccgcccaggccatgaccgccgc
tatgccatcgacgcacgcaaaatcgagcgtgaactcggctggaaacctgccgaaaccttc
gaaaccggcattcgcaagacagtcgcttggtacctggccaaccaggaatgggtgaaaggt
gtcatggacggcagctaccgtgactgggtagtacagcaatacggggcgaataaagcgtga
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