Pseudomonas putida ND6: YSA_05580
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Entry
YSA_05580 CDS
T02170
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YSA_05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_05580
Enzymes [BR:
ppi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
YSA_05580
DNA repair and recombination proteins [BR:
ppi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YSA_05580
Prokaryotic type
YSA_05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
HHH_8
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AFK69789
UniProt:
I3UWB8
LinkDB
All DBs
Position
complement(3010317..3011384)
Genome browser
AA seq
355 aa
AA seq
DB search
MSPEQFSSAVLDWYDEHGRHDLPWQQGITPYRVWVSEIMLQQTQVSTVLNYFDRFMQALP
TVQALAEAPEDEVLHLWTGLGYYTRARNLQKAAKVVVEQHGGEFPRSVEQLTELPGIGRS
TAGAIASISMGIRAPILDGNVKRVLARYTAQAGYPGEPKVANQLWATAERLTPQQRANHY
TQAMMDMGATLCTRSKPSCLICPLQRGCEAHLHGEETRYPEPKPRKALPQRRTLMPLLAN
HEGAILLYRRPSSGLWGGLWSLPELDDIAQLDDLAYQHGLRLAGRHAMDGLTHTFSHFQL
AIEPWLVRVDPVGEHVVEADWLWYNLATPPRLGLAAPVKKLLERATDELIAGDAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgagcagttctccagcgcagtgctggactggtatgacgagcacggccggcac
gacctgccctggcaacagggcatcacgccgtaccgcgtgtgggtgtcggaaatcatgttg
cagcagacccaggtcagcaccgtgctcaattacttcgaccgcttcatgcaggccctgcca
accgtgcaagccctggccgaggcaccggaggacgaagtgctgcacctgtggacgggcctg
ggttactacacccgcgcacgcaacctgcaaaaggccgccaaggtcgtcgtcgagcaacat
ggcggcgaattcccgcgcagcgtcgagcagcttaccgagctgcccggcattggccgctca
actgccggcgccatcgccagcatcagcatgggcatccgtgcaccgatcctcgacggcaac
gtcaagcgcgtgctggcacgctacaccgcccaggccggctaccccggcgaacccaaggtt
gccaaccagctatgggccactgccgagcgccttaccccgcaacaacgcgccaaccactac
acccaggcgatgatggacatgggcgccacgctgtgcacgcgcagcaagcccagttgcctg
atctgcccgttgcagcgcggctgcgaagcgcacctgcacggtgaagaaacccgctacccc
gagcccaaaccgcgcaaggcgctgccgcaacggcgcacactgatgccactgctggccaac
cacgaaggcgccatcctgctttaccgccgcccttccagcggcctgtggggtggtttgtgg
agcctcccggagctggacgacatcgcccagctcgacgacctggcctaccagcacggcctg
cgcctggctggccgccacgccatggacggcctgacccacaccttcagccacttccagctg
gcgatcgagccttggctcgtgcgcgtcgacccggtcggcgagcacgtggtcgaggccgac
tggctctggtataacctcgccaccccgccgcgcctgggcctcgccgccccggtgaaaaag
ctgcttgaacgcgcgaccgacgaactgattgcaggagacgcccgatga
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