Pseudomonas putida ND6: YSA_10560
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Entry
YSA_10560 CDS
T02170
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppi03000
]
YSA_10560
Transcription factors [BR:
ppi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
YSA_10560
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AFK72493
UniProt:
I3V422
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Position
complement(5644222..5645217)
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AA seq
331 aa
AA seq
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MQTSSPQATDLLILFSSSIDNFYKTNDRPDMNVKQLRAFVAVAKYQSFAQAGEHLHVSQP
ALSLTIKALEENLGGALLSRTTRSVSLTAEGEVLLPLARRLLADWDDTEEMLRQRFTLQL
GRVSVAAMPAFAGNLLPHALKVFRQRYPKVNVTVHDVINEQVQELVRHRRVELGIGFEPD
NIDGLDFHPLYMDRFVAVVAADSPLALLPQVSWAQLMAEDFVALQRPSAVRLLMEQNVAA
RHGKLAVAFESHQLTTIGRMVASGLGVSAVPALCINQMQELGARCVTLVEPTVERRIGVI
ALSEHKLSTAAQALLEVLLSNTRIPEVTCVT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacatcttcaccgcaagcgactgatttgttaattttgttttcgtcatcgattgat
aatttttacaaaacaaacgataggcccgacatgaacgtcaaacaattgcgcgcctttgtt
gccgtggccaagtaccagagcttcgcccaggccggtgaacacctgcacgtttcgcaaccg
gcactgagcctgaccatcaaggcactggaagaaaacctcggcggcgccctgctcagccgc
accacgcgcagcgtcagcctgactgccgaaggcgaagtgctgctgccactggcacgccgc
ctgctggccgactgggacgacaccgaagagatgctgcgtcagcgctttaccctgcaattg
ggccgtgtgtcagtggcggccatgccggcttttgccggcaacctgttgccccacgcgctc
aaggtgtttcgccagcgctaccccaaggtcaacgtcacggtgcacgacgtgatcaacgaa
caggtacaggaactggtacgccatcgccgcgtcgaactgggcatcggcttcgagccggat
aacatcgatgggctggacttccacccgttgtacatggaccgcttcgttgcggtagtggcc
gccgactcgcccttggcgctgctgccccaggtcagctgggcacagctgatggccgaagat
ttcgtggccctgcagcgcccttcggcggtgcgtctgctgatggagcagaatgtggcggcc
cgccacggcaagctggcagtcgcgttcgaaagccaccagctgacgaccatcggccgcatg
gtggccagcggcctgggggtcagtgccgtgccggcgctgtgcatcaaccagatgcaggag
ctaggtgcccgctgcgtaaccttggtcgagcccactgtcgagcggcgcatcggcgtgatt
gccctcagcgagcacaagctttccaccgcagcgcaggcactgcttgaggtgcttctttcc
aatacccggatcccggaggtgacatgcgttacgtaa
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