KEGG   Phaeobacter piscinae: PhaeoP14_01576
Entry
PhaeoP14_01576    CDS       T05105                                 
Symbol
nrdJ
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase NrdJ
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ppic  Phaeobacter piscinae
Pathway
ppic00230  Purine metabolism
ppic00240  Pyrimidine metabolism
ppic01100  Metabolic pathways
ppic01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:ppic00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PhaeoP14_01576 (nrdJ)
   00240 Pyrimidine metabolism
    PhaeoP14_01576 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppic03400]
    PhaeoP14_01576 (nrdJ)
Enzymes [BR:ppic01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PhaeoP14_01576 (nrdJ)
DNA repair and recombination proteins [BR:ppic03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PhaeoP14_01576 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD RuvA_C TACO1_YebC_N
Other DBs
NCBI-ProteinID: ATG39677
LinkDB
Position
complement(1684194..1687838)
AA seq 1214 aa
MKIERKFTKSGQDAYADLDFVPATSEIRNPDGTIVFRLEGVEVPAGWSQVASDVIAQKYF
RKAGVPSKLKKLREKGVPEFLWRSAPAGDDVEFGGETSSKQVFDRLAGAWCYWGWKGGYF
STEEDARAYFDEMRYMLATQRAAPNSPQWFNTGLHWAYGIDGPAQGHHYVDYKTGKLTKS
DSAYEHPQPHACFIQSVSDDLVQDGGIMDLWVREARLFKYGSGTGTNFSHLRGEGEPLSG
GGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHPDIEQFIDWKVIEEQKVASI
VAGSKMHEKMLNGLFEAIRSWDGAEADAYDPAVNDGLKLAIREAKKVAIPETYVKRVLDY
AKQGHTSIEFPTYDTDWDSDAYSSVSGQNSNNSIRVTNAFLHAVKKDADWQLINRVDGKV
AKTVKARDLWEKVGHAAWACADPGIQFHDTVNEWHTCPSDGEIRGSNPCSEYMFLDDTAC
NLASLNLLTFLKDGEFQAEDYMHACRLWTVTLEISVMMAQFPSKEIAQRSYDFRTLGLGY
ANIGGLLMNMGFGYDSAEGRALCGALTAIMTGVSYATSAEMASELGPFARYEQNASDMLR
VIRNHRAAAHGSVDGYEGLAVKPVPLDSANCPDPRLAELAMSSWDEALELGERHGFRNAQ
ATVVAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPAALEGLGYSPAQI
EEIVSYAVGHGTIGNAPGINHTSLAGHGFGPAELAKVDAALESAFDIRFVFNQWTLGEDF
CTGVLGIPATKLNDPTFDLLRHLGFGKADIEAANDHVCGSMTLEGAPHLKEEHYHIFDCA
NPCGKKGKRYLGVESHILMMAAAQSFISGAISKTINMPNDATIEDCQKAYELSWSLGVKA
NALYRDGSKLSQPLAAALVEDDDEAAEVLESGSQQEKAITLAEKIVEKVVIKEVVKSHRT
KMPQRRKGYTQKAVVGGHKVYLRTGEYEDGNLGEIFIDMHKEGAGFRAMMNNFAIAVSVG
LQYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYVFRELAVSYLDRTDLAHVKP
EGASFDDLGRGEEEGVSNVSELSETAATRSLEVLKQISSTGYLRKRLPQELVVLQGGQTE
MLADGTDPVSALQSLVPETSTAAAPAVSGGMDARTKAKMQGYEGEACGDCGNYTLVRNGT
CMKCNTCGGTSGCS
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgaagattgaacggaaattcacaaaatctgggcaggacgcatatgccgatctggacttc
gttcctgcaacgtcggaaatccgcaatccggatggcaccatcgtgttccgtcttgagggc
gtcgaggttccggcgggctggagtcaggttgctagcgacgttatcgcgcagaaatatttc
cgtaaggcgggcgtgccgagcaaactgaaaaagctccgtgaaaaaggcgttcctgaattc
ctctggcgctctgcaccagcgggggatgatgtagagtttggcggtgagacctcctccaag
caggtgtttgatcgcctcgccggtgcctggtgctactggggctggaaagggggctatttc
tccaccgaggaggatgcgcgcgcttatttcgacgaaatgcgctacatgctggcgacccag
cgcgccgcgcccaacagcccgcagtggttcaacacgggtctgcactgggcctatggcatc
gacggtccggcccaggggcaccactatgtcgactataaaaccggcaagctgaccaaatcc
gacagcgcctatgagcatccccagcctcatgcctgctttattcagtcagtttctgacgat
ctggtgcaggacggcggcatcatggatctttgggtgcgcgaggcgcgcctgttcaaatat
ggctccggcaccggcaccaacttcagccatctgcgcggtgagggcgagccgctgtccggt
ggcggcaaatcctctggcctgatgggcttcctcaaaatcggtgaccgtgcagcaggcgcc
attaaatccggcggcaccacgcggcgcgcggccaagatggtgatcgtcgatgcggatcac
cctgatattgaacagttcatcgactggaaagtgatcgaagagcagaaagtggcgtccatc
gtcgctggctccaagatgcatgagaagatgctgaacggcctgttcgaggccattcgcagc
tgggacggggccgaagccgatgcctatgatccggctgtgaacgacgggctgaagctggct
attcgcgaggcaaaaaaggtcgcgatcccggagacatatgtcaaacgcgtgctggattat
gcaaagcagggccacacctcgattgaatttccgacctatgacaccgactgggacagcgac
gcttatagctcggtctcagggcagaactccaacaactcgatccgggtcaccaatgccttc
ctgcatgcggtgaagaaagacgccgactggcagctgatcaaccgcgtcgatggcaaggtg
gccaaaacggtgaaggcccgcgatctgtgggaaaaggtggggcatgcggcctgggcctgc
gctgatccgggaatccagttccacgatacggtcaacgaatggcacacgtgcccgtctgat
ggcgaaattcgcggttcaaacccgtgttcggaatatatgttcctggacgacaccgcctgt
aacctcgcgtcgctgaacctgctgaccttcctcaaggatggggagttccaggccgaagat
tatatgcacgcctgccgcctgtggaccgtgacgttggaaatctccgtcatgatggcgcag
ttcccgtcgaaggaaatcgcgcagcgctcttatgatttccgcacgctcggcctgggctat
gccaatatcggcggcctgctgatgaacatgggctttggctatgacagtgccgaggggcgc
gcgctttgcggtgcgctgacggcaatcatgaccggcgtgtcttatgcgacctcggcagaa
atggcgtcggaactggggccatttgcccgctatgaacagaacgccagcgatatgctgcgg
gtgatccgcaatcaccgggcggctgcgcatgggtcggttgacggctatgaaggcctggcc
gtgaagccggtgccactggacagtgcaaattgccccgatccgcgtctggcggaactggca
atgagcagctgggatgaggcgctggagctgggcgagcgtcacgggttccgcaatgcgcag
gcgaccgttgtcgcacccaccggcaccattggtctggtgatggattgcgacaccaccggg
attgagccggattttgccctggtgaagttcaagaagctggccggtggcggctacttcaag
atcatcaaccgttcggtgcctgcggcgctggaggggctgggctattccccggcgcagatt
gaagagatcgtctcctatgcggtgggtcacggcaccatcggcaatgcgccgggcatcaac
catacctcgctggccggccatgggtttggcccggcggaactggcgaaggtcgatgccgca
ctggaaagtgcctttgacatccggtttgtcttcaaccagtggacgctgggtgaggatttc
tgcaccggcgttctgggcatcccggcaaccaagctgaacgacccgacctttgatcttttg
cgtcaccttggctttggcaaggccgatatcgaggccgcaaatgaccatgtctgcgggtcg
atgacgctggaaggtgcgccgcatctgaaggaagagcattatcacatctttgattgtgcc
aatccctgcggcaagaaaggtaagcggtaccttggggttgagagccatatcctgatgatg
gcggcggcgcagagctttatctcgggcgcgatctccaagaccatcaatatgcccaatgac
gcgaccattgaggattgtcagaaagcctatgaactcagctggtcgctgggggtgaaggcc
aatgcactctaccgtgacggttccaagttgagccagccgctggccgcggcgcttgttgag
gatgatgacgaggcggcagaggttctggaaagcggctcgcagcaggaaaaagccatcacc
ctggccgagaaaattgtcgagaaagtggtcatcaaagaggtggtgaaatcccatcgcaca
aagatgccacaacgccgcaagggctatactcagaaggcggtcgtcggggggcataaggtc
tatctgcgcaccggcgagtatgaagatggcaacctgggcgaaatcttcatcgacatgcac
aaggaaggggctggcttccgggcgatgatgaacaacttcgccatcgcggtctcggttggt
ctgcaatacggcgtgccgctggaggaattcgtggatgccttcaccttcaccaaatttgag
cctgcgggcatggtgcagggcaacgactcgatcaaaaacgcgacctcgatcctcgactat
gtgttccgcgaattggcggtgagctatctggaccgcaccgatctggcgcatgtcaaaccg
gaaggcgccagctttgacgatctgggccggggtgaggaagagggtgtctccaacgtttcc
gaactgagtgagaccgccgcgacccggtcgctggaagtgctgaagcagatttcctccacc
ggctatctgcgcaagcgcttgccgcaggagctggttgttcttcagggcggccagaccgag
atgctggcggatggcactgatcctgtctctgccttgcaatcgcttgttcctgagacgtca
accgcggcagcgccggcagtctccggcggcatggatgcccggaccaaggcaaagatgcag
ggctatgaaggcgaggcctgcggcgattgcggcaattacacgctggtgcgcaatggcacc
tgcatgaaatgcaacacctgcggcggcacctctggctgtagctga

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