Photobacterium piscicola: ACJZU6_13815
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Entry
ACJZU6_13815 CDS
T11087
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppil Photobacterium piscicola
Pathway
ppil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACJZU6_13815 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppil03400
]
ACJZU6_13815 (ung)
Enzymes [BR:
ppil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACJZU6_13815 (ung)
DNA repair and recombination proteins [BR:
ppil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACJZU6_13815 (ung)
Prokaryotic type
ACJZU6_13815 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XLM58010
LinkDB
All DBs
Position
1:complement(2928485..2929147)
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AA seq
220 aa
AA seq
DB search
MTASWQTFIEQQQQLPYFNDIEQAVATARAEGKTVFPPQDDVFNAFFSTPLMATKVVILG
QDPYHGPEQAHGLSFSVLPGVKTPPSLVNMYKELATDINGFTIPEHGYLQPWAEQGVLLL
NTVLTVEQGNAHSHAKIGWETFTDRAIEYINDNTEGVIFLLWGAHAQKKGKKIDLERHHV
LTSAHPSPLSAYRGFFGCKHFSEANNLLSMMSKSPINWQL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaagctggcaaacatttatcgagcagcaacaacaattaccgtattttaatgat
atcgaacaagcagttgctacggctcgtgctgagggtaagactgtttttcctcctcaagat
gatgtgtttaatgcttttttcagtacgccattaatggcaacgaaagtcgtgattttaggt
caagatccttatcatggtcctgaacaagcacatgggttgagtttttcggtattacctgga
gtaaaaacgccaccatcattggttaatatgtacaaggaattagcgacggatatcaatgga
tttactattcctgagcatggttatttacaaccatgggctgagcagggggtactgttactt
aataccgtcttaaccgttgaacaaggtaatgcgcactctcacgctaaaattggttgggaa
acgtttactgatcgcgctattgaatacattaatgataataccgaaggggtgattttttta
ttgtggggcgcacatgctcagaaaaaaggtaaaaaaattgatcttgaacgacatcacgtt
ttaacgtcagcacatccttcaccattatctgcttatcgtggttttttcggctgtaagcat
ttttcagaggctaataatttattgtcgatgatgagcaaatcaccgattaattggcaatta
taa
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