Pyramidobacter piscolens: CE91St28_06180
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Entry
CE91St28_06180 CDS
T08073
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppio
Pyramidobacter piscolens
Pathway
ppio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CE91St28_06180 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppio03021
]
CE91St28_06180 (rpoA)
03400 DNA repair and recombination proteins [BR:
ppio03400
]
CE91St28_06180 (rpoA)
Enzymes [BR:
ppio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CE91St28_06180 (rpoA)
Transcription machinery [BR:
ppio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CE91St28_06180 (rpoA)
DNA repair and recombination proteins [BR:
ppio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CE91St28_06180 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDF77824
LinkDB
All DBs
Position
666610..667638
Genome browser
AA seq
342 aa
AA seq
DB search
MWGSLEIMRPEIQVEECSSTAARLVIGPLERGYGQTIGNALRRVLLSSIKGAAISAVRVE
GAQHEFTTIPGMKEDVIELLLNLKHVPVRSHSAEYRTLKLDVEGGKKVTAADFQEDSDIE
FIDPDAYICTLAEGHSLSLEVYIEQGVGYATVDRPRPSYLPVDALMIDAIYSPILRVKYE
VQNERVGQKTDYEKIVMNVTTNGVVAPDIAVAEAAKLLREYFDIVIQELRKLHPAEPGLF
DDESASQPSGNGQAGDGADNPPENALLNKPVRELELSIRSENCLLRGGIHTIGDLVSRSK
DDLLKIRNLGKISLREIEEKMTKYGIVLSDDKASAENSSKED
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgtggggatctttggagattatgcggcctgagattcaagttgaagagtgttccagtacc
gccgcgcggctggttattggtccgctcgaacgcggttatggtcagacgataggtaacgct
ctccgtcgtgtactgctttcttcgatcaaaggggcggcgattagcgcggttcgcgttgaa
ggcgctcagcacgagtttacgacgatccctggcatgaaggaagacgttatcgagctgctg
ctgaatctcaagcacgtgcctgtccgctcccatagcgccgaataccgtacactgaagctg
gatgtggaaggcggaaagaaggttacggcagccgattttcaggaggacagcgacatcgag
ttcatagatcccgacgcgtacatctgcacgctggctgaaggacattcgctttcgctcgaa
gtttacatcgagcagggcgtgggctacgccactgtggatcggccgcgtccgagctattta
ccggtagacgctcttatgatcgatgccatttactctccgatccttcgtgtcaagtacgaa
gttcagaatgagcgcgtcggccagaagacggactatgaaaaaatcgtgatgaacgtcacc
acgaacggcgtcgtcgctcccgatatcgccgtcgccgaagcggcgaaactgcttcgcgaa
tatttcgatatcgtcatccaggagcttcgcaagcttcatcccgccgagcccgggctgttc
gacgacgaaagcgcatcccagccttccgggaacggtcaggccggagacggtgccgataat
ccgccggaaaatgccctgctgaacaaaccggtcagggaacttgaactttcaatcagaagt
gaaaactgcctgcttcgcggtggcattcataccattggcgatcttgtcagccgcagtaag
gatgacttgctgaagatccgcaacctgggcaagatctctcttcgcgagatcgaggagaag
atgaccaagtacggtatcgtcctcagtgacgacaaggcaagcgcagagaactcaagcaag
gaggactaa
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