Pseudoalteromonas piscicida: B1L02_20330
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Entry
B1L02_20330 CDS
T04942
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03060
Protein export
ppis03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
B1L02_20330 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B1L02_20330 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppis02044
]
B1L02_20330 (secD)
Secretion system [BR:
ppis02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
B1L02_20330 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_1st
SecD_SecF
SecD-TM1
MMPL
Sec_GG
Gp_dh_C
Motif
Other DBs
NCBI-ProteinID:
ASD69245
LinkDB
All DBs
Position
2:complement(407196..409028)
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AA seq
610 aa
AA seq
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MKDINSPARLSNPRGTTARAKRFFTALIVFLLILCALPNLYPNKNLIQIQASSNEVVPLS
LPELKSQLEGEGFKVKQIESHQGGYLVELENRTLTAEARAYMAESHSKLSVKVVSASTMP
QWLESTGLKPIKLGLDLDGGVLFVLKVDTEQAAQNKLQSLADEANSLRIKNRYRNLSIPQ
VINSEQVEVIAKAQGQNELVALTATLRELYPQLTNTTHSQGSLIKVNFRFAEAKKAEFDK
QLMTQALSTLRSRIEELGITEAVTQRQGTNYIRIELPGVQDPEQAKRIIGATAKLSFHAL
QEMGGQKLKDKSGAPISVDPVAIFGGDEIESATAGRDEYGKPLVELFLSSQGGEKINRFS
RNNVGKPMATVFSEYYADPKGEIKRKTEVISVATIQQVLNTRFSITNMQTMERAQELALL
LRAGSLDAPITFVKEQTIGPSLGEKNIESGFKALALGLSLTLLFMAIWYRKLGAVAITSL
LVNLVCLIGLMSLLPGVVLTLPGIAGLVLTIGMAVDTNVIIFERVRELRRKGIGMVTALK
QGYQQAMSSIIDANLTTMITALILLGIGYGPVKGFAITLALGIVTSIFAGVVVSGMLSES
LYSKSRKGVK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatcaattcgccagcgagattgtcaaaccctcgtggcactacagcgcgtgca
aaacgcttttttactgcgcttattgtattcctgttgattctttgtgcactaccaaacttg
tatcccaataagaatttgattcaaattcaagcaagtagtaacgaggttgtgcctctgtca
ctgcctgagcttaaatctcagctagaaggagagggattcaaagttaagcaaattgagtct
catcaaggtggctatttagttgaacttgaaaaccgcacgctaaccgccgaagcgcgtgct
tatatggctgagtctcactcaaagctaagtgttaaggttgttagtgcttcaacaatgcca
cagtggttagaaagcacaggactcaaaccgatcaagctaggactagacttggacggcggt
gtgttgttcgtactcaaggttgacacagaacaagctgcacaaaataaactacaatctctc
gctgatgaagccaatagcctacggataaaaaatcgttatcgtaacctttctatccctcaa
gttattaatagtgagcaggttgaggtgattgctaaagcacaagggcaaaatgaactcgtt
gcactaacggcgacactgcgcgagctataccctcaattaaccaatacaacccatagtcaa
ggcagtttaattaaagttaacttccgctttgcagaagcgaaaaaagcggagttcgataag
cagcttatgacgcaagcgctgtctaccttacgttcgcgtattgaggaactcgggatcaca
gaagcggttacgcaacgtcaaggcactaattatatacgaattgaattacctggcgtgcaa
gacccagaacaagccaagcgtattatcggcgcaacagcaaagctttcatttcatgcatta
caagaaatgggaggtcaaaaattaaaggataagtctggcgctccgatttcagtcgaccca
gttgccatttttggcggggatgaaatagagtccgcaacagcaggaagagacgaatacgga
aaacctttagtggaactattcttatcttctcaaggtggtgaaaagatcaatcgattttct
agaaacaatgttggtaaaccaatggctactgtattcagcgaatattacgcggatccaaaa
ggagagattaagcgcaaaacggaagtgatttcagtagccactattcaacaagtattaaat
acccgattcagtattaccaatatgcaaactatggaacgcgcgcaggagttagcattattg
ttacgagcgggttctctagacgcaccaatcacctttgtgaaagagcaaaccattggtcct
tcattgggcgaaaagaatattgaaagcggctttaaagcattggctttagggttaagccta
actttgctgtttatggcaatatggtatcgcaagctaggcgcagtggccattacctcatta
ctggtaaacttagtttgcctgattggattaatgtcgctgcttcctggtgtggtgcttacc
ttgcccggcattgcgggcctagtcttgactattggtatggcagtcgacaccaatgtgatt
atttttgagcgagttcgcgaattaagacgtaaaggcatcgggatggttactgcattaaag
caaggttatcaacaagccatgtcgagtattatcgatgctaacttaaccacgatgataact
gctcttatcctacttggtatcggttatggaccagtaaaagggttcgcgatcactttggcg
ctgggcatagtaaccagtattttcgccggtgtggtcgtctccggtatgttatcagaatct
ctttattcaaaatcacgtaaaggcgtaaagtaa
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