Pseudomonas plecoglossicida: RK21_02422
Help
Entry
RK21_02422 CDS
T03646
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00260
Glycine, serine and threonine metabolism
ppj00460
Cyanoamino acid metabolism
ppj00630
Glyoxylate and dicarboxylate metabolism
ppj00670
One carbon pool by folate
ppj00680
Methane metabolism
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
ppj01230
Biosynthesis of amino acids
ppj01240
Biosynthesis of cofactors
Module
ppj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RK21_02422
09102 Energy metabolism
00680 Methane metabolism
RK21_02422
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RK21_02422
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RK21_02422
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RK21_02422
Enzymes [BR:
ppj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RK21_02422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AJG13930
UniProt:
A0A0B5KBX2
LinkDB
All DBs
Position
complement(2542551..2543804)
Genome browser
AA seq
417 aa
AA seq
DB search
MFHKSLTLSDFDPALSAAIGREVQRQEDHIELIASENYTSPQVMQAQGTELTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKQLFGAGYANVQPHSGSQANAAVYLALLQAGDTLLGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHQPKMIVAGFSAYSKT
LDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLIL
AKADPELEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEALAPGFKDYQCQVISNAQAMAQV
FMQRGFDVVSGGTDNHLFLVSLIRQGITGKDADAALGRAHITVNKNAVPNDPQSPFVTSG
LRIGTPAVTTRGLKEAECRALATWICDILDHLGDADVEAQVARQVAALCKLFPVYPA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttccacaagagcctgaccctgtccgatttcgaccctgcactgtccgcggccatcggc
cgtgaagtgcagcgccaggaagaccacatcgagctgatcgcttcggaaaactacaccagc
ccccaggtgatgcaggcccagggcaccgaactgaccaacaagtacgccgaaggctacccc
ggcaagcgttactacgggggctgcgagcatgtcgacgtggtcgagcagctggccatcgac
cgcgccaagcagttgttcggtgccggttatgccaacgtccagccacactcgggctcccag
gccaacgcggcggtctacctggctctgctgcaggccggtgataccttgttgggcatgagc
ctggctcatggtggccacctgacccacggggccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcaatacggcatcgatgccaacggcctgattgactacgacgaagtcgagcgc
ctggcggtcgagcaccagccgaagatgatcgtggctggtttctcggcctactcgaagacc
ctcgacttcccgcgtttccggcagatcgccgacaaggtcggggcctacctgttcgtcgac
atggcccacgtcgccgggctggtcgcggcaggcctgtaccccaacccgctgccgtatgcc
gatgtggtcaccaccaccacccacaagaccttgcgcgggccgcgtggcggcctgattctg
gccaaggccgacccggagcttgagaaaaaactcaactcggcggtgttcccaggcgggcag
ggcgggccgctgatgcacgtgatcgcggccaaggcggtgtgcttcaaggaggccctggcg
cctggtttcaaggattaccagtgccaagtcatcagcaacgcccaggccatggcgcaggtg
ttcatgcagcgcggtttcgacgtggtttccggtggcaccgacaaccatttgttcctggtc
agcctgatccgccagggcatcaccggcaaggatgccgacgccgcgctgggccgtgcgcac
atcacggtgaacaagaacgcggtgcccaacgacccgcagtcgccgttcgtgacctcgggc
ctgcgcatcggtaccccggcagtgactacccgtgggctcaaggaggcggaatgccgcgcc
ttggcgacctggatctgcgacatcctcgaccatctcggtgatgccgacgtcgaggcccag
gtggcgcgccaggtggcagcgctgtgcaagctgttccctgtctatccggcctga
DBGET
integrated database retrieval system