Pseudomonas plecoglossicida: RK21_03778
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Entry
RK21_03778 CDS
T03646
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RK21_03778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_03778
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RK21_03778
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AJG15286
UniProt:
A0A0B5KI59
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Position
3967365..3969950
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AA seq
861 aa
AA seq
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MNKAISDFSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELL
IPDDWPRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGC
LLIYAKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQ
TAMASRLLSRWLNRPLRDLKVLQARQDSIRCLLDGYRFEKLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALGALPELQNAMAELEAPHLARLAAITGTYPELASLLERAIIDNPPA
VIRDGGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIEL
PTKQAEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLIS
HLAPLQDSAAALAELDVLSNLAERALNLDLNCPRFVDEPCLRIEQGRHPVVEQVLTTPFV
ANDLGLDNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAERLAQ
LRAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPTAVIQRAREHLARLETTSLPHEQPTAQKAKDVPQVPHQSDLFASLPHPAIEKLGKL
QLDEMTPRQAIEMLYQLKNLL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaatttccgatttttccgcacacaccccaatgatgcagcagtactggaag
ctgaagaaccagcacccggaccagctgatgttctaccgcatgggcgacttctacgagatc
ttctacgaagatgcgaaaaaagccgcgaaactgctggacatcaccctgaccgcgcgcggt
cagtcggccggccagtccatcccaatgtgcgggattccgttccattcgctggaaggctac
ctggccaagctggtcaagctcggcgaatcggtggtgatctgcgagcagattggcgaccct
gccaccagcaagggcccggtggaacgtcaggttgtgcgcatcatcaccccgggtacggtc
agcgacgaggccctgctcgacgagcgtcgcgacaacctgattgccgcgctgctcggggac
gagcgcctgttcggcctggccgtactggacatcaccagtggcaacttcagcgtgcaggag
atcaagggctgggaaaacctgctggccgagctcgagcgcctcaacccggtcgagctgttg
atccccgacgactggccgcgcgacctgccggccgagaaacgaccgggcgcccgtcgccgt
gcgccatgggacttcgaccgcgactcggcgcgcaaggccctgtgccagcagttcgcgacc
aaggacctcaagggctttggctgcgacaagctgaccctggccatcggtgccgccggttgc
ctgctgatctatgccaaggaaacccagcgcaccgccctgccacacctgcgcagcctgcgc
cacgaacgcctggacgacacggtcattctcgacggtgccagccgccgcaacctggagctg
gacatcaacctggccggcggccgagacaacaccctgcagtcggtgatcgaccgctgccag
accgccatggccagccgtttgctgagccgctggttgaaccgcccgttgcgcgatctcaag
gtgctgcaggcgcgccaggactcgatccgctgcctgctcgacggctaccgcttcgagaag
ctgcagccgcagctcaaggaaattggcgatatcgagcggattctcgcccgtatcggcctg
cgcaatgcccgcccacgcgatctggcacgcctgcgcgatgcacttggggcgctgcccgag
ttgcagaatgccatggccgagctggaggcaccgcacctggcgcgtctggccgccattacc
ggcacctatcccgaactggctagcctgctggagcgggcgatcatagacaacccgccggcg
gtgatccgcgatggcggcgtgctcaaggccggctatgacaacgaactggacgagttgctg
gcgatcagcgaaaacgccggccaattcctgatcgatctggaagcgcgggaaaaggcccgt
actggccttgccaacctcaaggtcggctacaaccgggtgcacggctacttcatcgaacta
ccgaccaagcaggccgagcaggccccgggtgactacatccgccgtcagaccctaaagggc
gccgagcgcttcatcaccccggagctgaaggcgttcgaggacaaggcactgtcggccaag
agccgcgccctggcacgcgagaagatgctctacgatgccctgctggaaaccctgatcagc
cacctggcaccgctgcaggacagcgccgccgccctggccgaactggacgtgctcagcaac
ctggccgaacgagcactgaacctcgacctgaactgcccacgcttcgtagacgagccgtgc
ctgcgcatcgagcagggccgtcacccagtggtggaacaggtactgaccacacccttcgtg
gccaacgacctgggcttggacaacagcacgcgcatgctgatcatcaccggcccgaacatg
ggcggtaagtccacctacatgcgccagaccgccctgatcgtgctgctggcgcatatcggc
agcttcgtgccggctgccagctgcgagctgtcgctggtcgaccgcatcttcacccgcatc
ggctccagcgacgacctggccggtggccgctcgaccttcatggtcgagatgagcgaaacc
gccaacatcctgcacaacgccaccgaccgcagcctggtgctgatggatgaagtgggccgc
ggcaccagtaccttcgacggcctgtcgctggcctgggccgccgcagagcgcctggcccag
ctgcgcgcctacacgctgttcgccacgcactacttcgaactcaccgtgctgccggaaagc
gagccactggtggccaacgtgcacctgaacgccaccgaacacaacgaacgcatcgtattc
ctgcaccacgtgctgcctggtcctgccagccagagctacggtctggccgtggcgcagctg
gccggcgtgccgacggccgtcatccagcgtgcccgtgaacacttggcgaggctggaaacc
accagcctgccgcatgaacaacccacggcccaaaaggccaaggacgtgccacaggtcccg
caccagagcgacctgttcgccagcctgccacacccggccatagagaagctgggcaagctg
cagctggacgaaatgacaccgcgtcaagctatcgaaatgctatatcaactaaagaacctg
ttataa
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