Pseudomonas plecoglossicida: RK21_03888
Help
Entry
RK21_03888 CDS
T03646
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppj03036
]
RK21_03888
Chromosome and associated proteins [BR:
ppj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RK21_03888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
AJG15396
UniProt:
A0A099MX25
LinkDB
All DBs
Position
complement(4080231..4081127)
Genome browser
AA seq
298 aa
AA seq
DB search
MPALDHPLIDQFLDALWLEKGLSDNTRMSYRSDLALFNGWLQEHGVSLPDAGRDLIIDHL
AWRLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVE
ALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLALDQVNLRQGVLRVMGKGSKERLV
PMGEEAVLWLQRYLRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctagaccaccccctgatcgaccagttcctcgacgccctgtggcttgaaaag
ggcctgtccgacaacacccgcatgtcctaccgcagcgacctggccctgttcaacggttgg
ctgcaggaacacggcgtcagcttgcccgacgccggccgcgacctgattatcgaccacctg
gcctggcgcctcgaccaaggctacaagccgcgctccacggcacgcttcctgtccggcctg
cgcggttttttccgctacctgctgcgggaaaagctggtggccatcgacccgaccctgcaa
gtcgacatgccgcaactgggcaagccgctgcccaagtcgttgtccgaagccgacgtcgaa
gccttgctgcaggccccggacctgggcgaagccattggccagcgtgaccgcgccatgctc
gaagtgctttacgcctgcggcctgcgggtcaccgaactggtcagcctggccctcgaccag
gtcaacctgcgccaaggcgtgctgcgggtgatgggcaagggcagcaaggagcgcctggtg
cccatgggcgaagaggcggtgctttggttgcagcgctacctgcgcgatggccgcgccgaa
ctgctcaatggccgtcccagcgatgtcttgttccccagccagcgtggcgagcagatgacc
cgccagaccttctggcatcgcatcaagcaccatgcccgggtcgccggtatcgacaaaccg
ctgtcgccgcataccctgcgccatgccttcgctactcatctgctcaaccatggtgccgac
ctgcgcgtggtgcagatgctgctgggccacagtgacctttcgaccacgcagatctacacc
catgtcgccaaggcccgcctgcagcaattgcatgcccagcaccacccgcgtggatga
DBGET
integrated database retrieval system
