Pseudomonas plecoglossicida: RK21_04344
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Entry
RK21_04344 CDS
T03646
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00260
Glycine, serine and threonine metabolism
ppj00460
Cyanoamino acid metabolism
ppj00630
Glyoxylate and dicarboxylate metabolism
ppj00670
One carbon pool by folate
ppj00680
Methane metabolism
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
ppj01230
Biosynthesis of amino acids
ppj01240
Biosynthesis of cofactors
ppj04981
Folate transport and metabolism
Module
ppj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RK21_04344
09102 Energy metabolism
00680 Methane metabolism
RK21_04344
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RK21_04344
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RK21_04344
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RK21_04344
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RK21_04344
Enzymes [BR:
ppj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RK21_04344
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AJG15852
UniProt:
A0A099MV25
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All DBs
Position
4546642..4547895
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDSNGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagctctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaggcccagggctcggtcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtcgtcgagcagctggccatcgac
cgtgccaaggaactgttcggcgccgactacgccaacgtccagccgcacgccggctcccag
gccaacgccgccgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggtggccacctgacccacggtgcttcggtaagctcctcgggcaagctgtac
aacgccatccagtacggcatcgacagcaacggcctgatcgactatgacgaagtcgagcgc
ctggctgtcgagcacaagccgaagatgatcgttgccggcttctcggcctactcgcaggtg
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtgtacccgaaccctgttccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttccctggcgcccag
ggtggcccgctggagcacgtcatcgctgccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcttaccagcagcaggtcgtgaagaacgcccaggccatggccagcgtg
ttcatcgagcgtggtttcgacgtggtttccggtggcacccagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggcaaggacgctgacgccgccctgggcaaagccttc
attaccgtcaacaagaactcggtaccgaacgacccacgttccccgttcgtcacctcgggc
ctgcgtttcggcaccccagccgttaccacccgtggtttcaaggaagccgagtgccgcgag
ctggctggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtttacggcaactga
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