Pseudomonas plecoglossicida: RK21_05099
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Entry
RK21_05099 CDS
T03646
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppj03016
]
RK21_05099
03036 Chromosome and associated proteins [BR:
ppj03036
]
RK21_05099
Transfer RNA biogenesis [BR:
ppj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RK21_05099
Prokaryotic type
RK21_05099
Chromosome and associated proteins [BR:
ppj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RK21_05099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
Thi4
HI0933_like
Pyr_redox
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJG16607
UniProt:
A0A099N825
LinkDB
All DBs
Position
complement(5340694..5342586)
Genome browser
AA seq
630 aa
AA seq
DB search
MDFPSRFEVIVIGGGHAGTEAALASARMGVKTLLLTHNVETLGHMSCNPAIGGIGKSHLV
KEIDALGGAMALATDKSGIQFRVLNNRKGPAVRATRAQADRAIYKAVVREILENQPNLWI
FQQSCDDLIVEQDQVKGVVTQMGLRFFAESVVLTTGTFLGGLIHIGLQNHSGGRAGDPPS
IALAHRMRELPLRVGRLKTGTPPRIDGRSVDFSVMTEQPGDTPIPVMSFMGNAQMHPRQV
SCWITHTNARTHEIIASNLDRSPMYSGVIEGVGPRYCPSIEDKIHRFADKESHQVFIEPE
GLTTHELYPNGISTSLPFDVQLELVRSIRGMENAHIVRPGYAIEYDYFDPRDLKYSLETK
VIGGLFFAGQINGTTGYEEAGAQGLLAGTNAALRAQGRDSWCPRRDEAYIGVLVDDLITL
GTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLIDDQRWAAFCAKRDGIEREEQRL
KSTWVRPNTEQGQAIVDKFGTPLSHEYSLLNLLARPEIDYAGLIEATGGEAIDPQVAEQV
EIRTKYAGYIDRQQDEIARLRASEDTRLPVDIDYSTISGLSKEIQGKLGQTRPETLGQAS
RIPGVTPAAISLLLIHLKKRGAGRELEQSA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtggatttcccttcccgttttgaagtgatcgtcatcggcggcggccatgccggtaccgag
gctgcgcttgcgtctgcacgcatgggtgtgaaaaccctgctgttgacccataacgtggaa
accctcggtcacatgagctgcaaccccgctattggcggtattggcaaaagccatctggtc
aaagagatcgatgccctcggcggcgccatggcgctggccaccgacaagagcggcatccag
ttccgcgttctgaacaaccgcaagggcccggctgtacgcgctacccgtgcacaggccgac
cgcgccatctacaaggcagtggtgcgtgaaatcctggaaaaccagccgaacctgtggata
ttccagcagtcctgcgacgacctgatcgtcgagcaggaccaggtcaaaggcgtggtgacc
cagatgggcctgcgtttcttcgccgaatcggtggtactgaccaccggtactttcctcggt
gggcttatccacattggtttgcaaaaccattccggtggtcgcgccggcgatccgccttcg
atcgccttggcccaccgcatgcgtgaactgccgctgcgcgttggccgcctgaaaaccggt
accccgccgcgtatcgacggccgttcggtggacttctcggtgatgaccgagcaaccaggc
gatacgccgatcccggtgatgtcgttcatgggcaacgcccagatgcacccgcgtcaggtg
agctgctggattacccacaccaatgcgcgcacccacgagatcatcgcctcgaacctcgac
cgttcgccgatgtactcgggtgtaatcgaaggtgtcggcccgcgctactgcccgtcgatc
gaagacaagatccatcgcttcgccgacaaggaaagccaccaggtgttcatcgagccggaa
ggcctgaccacccatgagctttaccccaacggtatttccacttcgctgccgttcgatgtg
caactggagctggtgcgatccatccgcggcatggagaacgcacacatcgtgcgcccgggc
tacgccatcgaatacgactacttcgacccgcgcgacctcaagtacagcctcgagaccaag
gtcatcggcggtctgttcttcgccggccagatcaacggcaccaccggttatgaagaagcc
ggcgcacaaggcttgctggccgggaccaatgccgccctgcgtgcgcagggccgagacagc
tggtgcccgcgccgcgacgaggcatacatcggcgtactggtcgacgacctgattaccctg
ggtacccaggagccgtaccgcatgttcacttcgcgtgccgagtaccgcctgatcctgcgc
gaagacaacgccgacctgcgcttgaccgaaaagggccgcgaactcggcctgatcgacgat
cagcgttgggccgccttctgcgccaagcgcgacggcatcgagcgcgaggagcagcgtctg
aagtcgacctgggtccgcccgaacaccgagcaaggccaggccattgtggataagttcggt
actccgctcagccacgagtacagtctgctcaacctgctggcgcgcccggaaatcgactac
gccgggctgattgaggcaaccggtggtgaagcgattgatccacaggtcgccgagcaggtc
gaaatccgcaccaagtacgctggttacattgatcgccagcaggatgaaatcgcacgtctg
cgtgccagcgaagacacccgcctgcctgtggatatcgattactcgacgatttccggcctg
tccaaggaaatccagggcaagctgggccagacccgtccggaaaccctgggtcaggcttcg
cgtatcccgggcgtgaccccggcggcgatttccctgttgctgattcacttgaaaaaacgc
ggcgctggccgcgaattggagcaaagcgcttga
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