Pandoraea pnomenusa 3kgm: U875_16590
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Entry
U875_16590 CDS
T02936
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00630
Glyoxylate and dicarboxylate metabolism
ppk00680
Methane metabolism
ppk01100
Metabolic pathways
ppk01120
Microbial metabolism in diverse environments
ppk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U875_16590
09102 Energy metabolism
00680 Methane metabolism
U875_16590
Enzymes [BR:
ppk01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
U875_16590
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_6
Fer4_10
Fer4_Nqo3
Fer4_9
Fer4_15
Fer4_2
Fer4_NDSU1
Fer4_4
Fer4_8
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
AHB06775
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Position
3578434..3581298
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AA seq
954 aa
AA seq
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MMDPMFEKDYGTPRRESTQEVTLEIDGEQVTVPAGTSIMRAAAEGGVNVPKLCATDSLEP
FGSCRLCLVEIEGRRGFPASCTTPVEPGMKVRTQSPKLQELRKGVMELYISDHPLDCLTC
AANGDCELQDMAGVTGLREVRYGFDGANHFDSEKDESNPYFTYDASKCIVCNRCVRACEE
TQGTFALTISGRGFEARVSAGQDQPFMESECVSCGACVAACPTATLQEKSVIHLGQAEHA
KITTCAYCGVGCSFKAEMKGNEVVRMVPHKDGQANEGHACVKGRFAWGYATHKDRILTPK
IRKKITDPWQEVSWDEALDYAASEFKRIQAKYGRDSIGGLVSSRCTNEEDYLVQKLVRAA
FGNNNVDTCARVCHSPTGYGLKATLGESAGTQTFKSVEHSDVILVMGANPTDGHPVFGSR
MKKRLRQGAKLIVIDPRRIDLVQSPHIKADYHLQLRPGTNVAMINALAHVIVTEGLMADE
FIAERCEDRAFNQWRDFIARAENSPEATEAHTGVPAHLVRGAARLYATGGNAAIYYGLGV
TEHAQGSTTVIGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGAFPHELPGYRHVSD
STARALFEAEWGVELQAEPGLRIPNMFDAALAGTFMGLYCQGEDIVQSDPNTQHVTHALE
HMECIVVQDIFLNETAKYAHVLLPGSSFLEKDGTFTNAERRISRVRQVMPPRAGYADWEV
TIQLAKRLGYEMNYSHPSEIMDEIARLTPTFTGVSYEKLDRVGSVQWPCNENAPDGTPVM
HIDEFVRGKGKFLITQYVPTDEKVTKRFPLILTTGRILSQYNVGAQTRRTANNHWHDEDR
LEIHPHDAEERGVKDGDWVGIQSRAGETVLRAVVSDRMQPGVVYTTFHFPESGANVITTD
NSDWATNCPEYKVTAVQVSPVAQPSEWQRQYSDFNRQQEAFHDHAVAAAQASTN
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgatggacccgatgtttgagaaggattacggcaccccgcgccgcgaatcgacgcaggaa
gtcacgctggagatcgacggcgagcaggtcaccgtgcccgccggcacctcgatcatgcgt
gccgccgccgaaggcggcgtcaacgttccgaagctgtgcgccaccgactcgctcgagccg
ttcggctcgtgccgcctgtgcctcgtggaaatcgaaggccgccgcggcttccccgcgtcg
tgcaccacgccggtcgagcccggaatgaaggtgcgcacgcaatcgccgaagctccaggaa
ttgcgcaagggcgtgatggagctgtacatctccgatcacccgctcgactgtctgacctgc
gcggccaacggcgattgcgaactgcaggacatggccggcgtgacaggcctgcgcgaggtg
cgctacggcttcgacggcgccaatcacttcgacagcgagaaggacgagtcgaacccctac
ttcacttacgacgcctccaagtgcatcgtctgcaaccgctgcgtgcgggcctgcgaagag
acccagggcaccttcgccctgacaatctcgggtcgtggcttcgaagcgcgcgtgtcggcg
ggtcaggaccagccgttcatggagtcggagtgcgtgtcgtgcggcgcgtgcgtggccgcc
tgcccgaccgccacactccaggaaaagtccgtcattcatctcggccaggccgagcacgcc
aagatcacgacctgcgcctattgcggcgtgggctgctcgttcaaggcagaaatgaagggc
aatgaggtcgtgcgcatggtgccgcacaaggacggtcaggccaatgagggccacgcctgc
gtgaaaggccgcttcgcctggggctacgccacgcacaaggaccgcattctcacgcccaag
attcgcaagaagatcaccgatccgtggcaggaagtgtcgtgggacgaggcactcgactac
gcggcgtccgaattcaagcgcattcaggccaagtacggccgcgactccatcggcggcctg
gtgtcctcgcgctgcacgaacgaggaggactacctcgtgcagaagctggtgcgcgcggcg
ttcggcaacaacaacgtcgacacctgcgcacgcgtttgtcactcgcccaccggctatggc
ctgaaggccacgttgggcgagtcggccggcacgcagacattcaagtccgtcgagcattcg
gacgtgatcctcgtgatgggtgcgaacccgacggatggtcacccggtattcggctcgcgc
atgaagaagcgtctgcgtcagggcgccaagctgatcgtgatcgacccgcgtcgcatcgat
ctggtccaaagcccgcacatcaaggccgactaccatctgcaactgcgccccggcaccaac
gtggcgatgatcaatgccctggcgcacgtgatcgtcaccgaagggctcatggccgacgag
ttcatcgccgagcgctgcgaagatcgcgcgttcaaccagtggcgcgacttcattgcgcgc
gccgagaattcgcccgaagccaccgaagcgcataccggcgtgcccgcgcatctcgtgcgc
ggcgccgcacgcctttacgccaccggcggcaacgcggcgatctactacggcctcggtgtg
accgagcacgcgcaggggtcgacgaccgtgatcggcatcgccaacctggccatggccacg
ggcaacatcggccgcgaaggcgtgggcgtgaatccgttgcgcggccagaacaacgtgcag
ggctcgtgcgacatgggcgccttcccgcacgaattgccgggctatcgtcacgtgtcggat
tcgaccgcgcgggcgctgttcgaggccgaatggggcgtcgagctgcaagccgagccgggg
ctgcggattccgaacatgttcgacgccgcgctcgcgggcaccttcatgggcctgtactgc
cagggcgaggacatcgtgcagtccgacccgaacacgcaacacgtcacgcacgcgctcgag
cacatggagtgcatcgtcgttcaggacatcttcctgaacgaaaccgccaagtatgcgcac
gtactgctgccgggctcgtcgttcctcgagaaggacggcacgttcaccaacgccgagcgc
cgcatctcgcgcgtgcgtcaggtcatgccgcctcgcgccggttacgccgactgggaagtg
acgattcagctcgccaagcgcctgggctacgagatgaactactcgcacccgtcggagatc
atggacgagatcgctcgccttacccccacgttcaccggcgtgagctacgaaaagctcgat
cgcgtgggcagcgtccagtggccttgcaacgagaacgcgcccgacggcacacccgtcatg
cacatcgacgagttcgtgcgcggcaagggcaagttcctgatcacgcagtacgtgccgacc
gacgagaaagtgaccaagcggttcccgttgatcctcacgaccggccgcatcctgtcgcag
tacaacgtgggggcacagacccgccgcacggccaacaaccactggcacgacgaggaccga
ctcgagatccatccgcacgatgccgaggagcgcggcgtgaaggacggtgactgggtcggg
atccagagccgggcgggcgagacggtactgcgcgccgtggtgagcgaccgcatgcagccg
ggcgtggtgtacacgacgttccacttcccggaatcgggggcgaacgtcattaccaccgac
aactccgactgggcgacgaattgccccgagtacaaggtcacggcggtgcaggtctcgccg
gtagcgcagccgtcggagtggcagcgccagtattcggacttcaatcgccagcaggaagcg
ttccacgatcatgcggtcgcggcggcgcaggccagtaccaactga
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