Postia placenta: POSPLDRAFT_104820
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Entry
POSPLDRAFT_104820 CDS
T01162
Name
(GenBank) predicted protein
KO
K14315
nucleoporin NDC1
Organism
ppl
Postia placenta
Pathway
ppl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
POSPLDRAFT_104820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppl03019
]
POSPLDRAFT_104820
Messenger RNA biogenesis [BR:
ppl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
POSPLDRAFT_104820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
FAD_binding_3
Phe_hydrox_dim
Motif
Other DBs
NCBI-ProteinID:
EED82559
JGI:
104820
LinkDB
All DBs
AA seq
1283 aa
AA seq
DB search
MEGNPAGLTWGVMDFIPDTNFPTTQAKNIIQSPLTGILGIIERGFLPYSMKAKEITWCSQ
YKGHIHSPNAGQGANVSMSDAYNLAWKLAYALSGQATSGILDTYEEERRPCSIELINLDE
ELHKLNRPDSLFANEYVNCIAVFISALDSFKARTCSQLEGFQSLAPRLPLGQRLPPGDIL
RYSDWNPCNLHDLIRYSLSFKVIIFPGNLLEADVATHLSDFVTSIATSLDDTKQSMIETS
VILRSSKYALPQVPDLADMLSDSRLYLDDDEHTSETEWHDRLYRTLGISEEGVATLLDPA
LPEKQPLDVVLTGSAVTARGRSPPQASLTTRPACIALQNEDRDEDAVVITSLNVIPFCCH
ADLLTMSRAELVVVADTLNARLPRILNIDVGRSRSAAYIRKSIELLVGLRKDATQTPEAE
RSRSVFTGVGEVSHSAGSPGLLDNATQQDASTGSVALEDSQEGFRDPDVASHRPQKKRRF
DAEATVEASDRPMISRPITRSQSHQDPQPEFTGAEANAERHPSKHYRGPWKVLFSTSWIP
ALTKHGDDLDAKGTEVTWCRSGSATTLSGRGFSFRFTHLQSRVAYRGEGEAYLEAQAGSD
TPGYDGPDVRDRGADDAAYRFGFGYAQRHCVEAMVKNYTYYIHVYCSKANVRHFGASVPD
IAFICLLISEQPEIFLTALNTGGGLIPVEDVIALAFAYLFRIVLMDRFAVRWKNLLHDHS
VSHVSQPETNAHQYLLARFVVALTTVSLFTALNCTMHAFLFGLLRSVVLPLLYMMPIVPQ
FLRPFTAHFLRGSWTMTLFFRHWSLLWRSFFLCLTTTTCWEMAESPLDEPVTVAHTTADP
VLTVVSGITSADGYFKHFAYAELSQLARGYSPAASARRSALFADQKYNPSMWACLVRDAL
LTLGKDYQLLLRRGSPEAPAPAPAPAPPKPELTLPATPLKLLRTSVLKPTPTSPLRAALD
TLASDGAISSAADSGVSQIPELFRSMVHASPSAEKAIESVKRSEERVVGMFEETRTKLQQ
RMEAAVHGRVPAAALEKMTPAFGVVERVRQWWTRDRVNKLVEMSLPNRHLDALAISNSYG
VVQRDIPKIIEALLSFLAAVEEYQAEISKTHVTPSPEELQNMSAKERQEKERLMTELEQA
GQIFAEVNDGLKEGIVHIVRTFGDKLAAFRFPPRIAQKLQGYMLHDDVVIVLRAQITEWQ
GWGGIRSQKRRLCLACQQAFVTDSLLTIYNIKSFERECGGFHDSTPGTNFWDATVKTRRI
TFGPPFKETEGPPTGKLSAERHV
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaacccagctggtctcacgtggggtgtaatggacttcattccggacacaaac
ttccccacgactcaagcgaaaaatatcatccaatctcctctcacaggaattctaggaatt
atagaacgcgggttccttccgtacagtatgaaagccaaagaaatcacatggtgcagtcaa
tacaaaggtcacatacattctcccaacgccgggcagggagcaaacgtatcgatgtctgat
gcgtacaaccttgcttggaagctggcatatgcgctaagcggacaggccactagcgggata
ctggacacgtatgaagaggaacgacggccttgcagtatcgagctcataaatctcgacgaa
gagctgcacaaactgaaccgtccggattccttgtttgcaaacgaatacgtgaactgtatc
gcagtgttcatttcggcgctagactcattcaaggccagaacctgttcacaacttgaagga
ttccagtctcttgccccccgtctacctctggggcaacggctacctcctggcgacattcta
cgatactccgactggaacccttgcaacctacatgacctcattcgctactctctctccttc
aaagtcatcattttcccaggaaatctacttgaagcagatgtagcgacccatctgagcgac
tttgtcacgagcatagcaacatccctcgacgatacaaagcagagtatgattgaaacatcc
gtcattcttcgttcctcgaagtacgctcttccgcaggtgccggatttggcagacatgctg
tccgattccagattatatctggacgatgacgaacatacgtctgaaaccgagtggcatgat
aggctatacaggaccctcggtatctccgaggaaggcgtagctactttgctcgatcccgcc
ctacccgagaaacaacctctggatgtggtcctgacaggctcagccgtcaccgcgcgcggg
cggtcccctccccaagctagcttgacgacccgcccggcatgcattgcgttgcagaacgaa
gaccgagacgaagacgctgtggtcatcacctccttgaatgtcatcccattctgctgccac
gcggacttgctcactatgtcgcgcgccgagctggtcgtggtggctgacacgctcaatgcg
aggcttccccgcatcctcaatatcgatgttgggcggtctcgctcggcggcgtacatccgg
aagtcgattgagctgctcgtgggcctgcgcaaagacgctacccagacgccggaagcagag
aggtcgcgatcggtcttcacaggtgtcggcgaggtgtctcatagcgccggttctccaggg
ctgctggataacgcaacacagcaagacgcatctactggaagtgtcgctctggaagactct
caggaggggtttagagaccccgacgtcgcatctcaccgcccccagaagaagagacgtttt
gatgctgaagcaactgtagaggcaagcgacaggcctatgatctcgcgcccaatcacccgt
tcccaatcgcaccaggacccgcagccagaatttaccggcgcggaagccaatgctgaaagg
catccatccaaacattaccgtggcccgtggaaggtcctcttctcgacctcttggatacct
gcactcacaaagcacggtgatgacctcgacgccaaagggacggaggtcacttggtgtcgg
tctggttcagccaccacgctctccggacggggattcagcttccgcttcactcacctccaa
tctcgcgtcgcctatcgtggagaaggtgaagcgtaccttgaagcgcaagctggatcagac
accccaggatacgacggacctgacgttcgggatcgaggggctgacgatgccgcctaccgc
ttcggcttcggatatgcacagcggcactgtgtagaagcaatggttaagaactacacgtat
tacatccatgtgtattgctccaaggcgaacgtgagacattttggagcctcagtccctgat
attgcattcatatgtctattgatcagtgagcagccagagatattcctgactgcccttaac
accggcggcggcctcatccccgtcgaagatgttattgctctggcttttgcgtacctcttc
cgaattgtccttatggaccgttttgctgttcgttggaagaatctcctccacgatcacagc
gtttctcacgtatcacagccagagacaaacgcgcaccagtatcttctcgctcgatttgtt
gttgcgctcactacagtctcgctcttcaccgcactcaactgcaccatgcacgcattcctc
ttcgggcttttgcggtccgtggtgctaccgctgctgtacatgatgccaatcgtcccacag
ttcctgcggcccttcacagcgcacttcctccggggctcatggacgatgaccttgttcttc
cggcactggtcgctactctggaggtcattctttttgtgcctcacgactacgacatgttgg
gagatggcagaaagtccgttagatgagcccgtcactgttgcgcacacaacggcggatcca
gtgttgaccgtagtctccggcatcacctctgcggatgggtacttcaagcatttcgcctac
gccgaactgagccagcttgcgagaggatactctcctgctgctagcgcgcgccgatcggcg
ctatttgcagaccagaagtacaatccaagcatgtgggcatgtctggtgcgcgacgcgctc
ctcacgctcggcaaggattaccaactactcctccgtcgaggaagcccagaggctcctgct
cctgcacctgcacctgcgcctccaaagccggagctgaccctccccgcgaccccactaaag
cttctccgtacctccgtccttaagccgactccaacgtcgcctctgcgcgccgctcttgac
acgctcgcctcagacggagcgatatcctctgcggctgatagcggtgtctcgcagatccca
gagctcttccgctccatggtacacgcgagcccatctgcagagaaggcgattgagtcggta
aagcggagtgaggaaagagtcgttgggatgttcgaggagacgaggaccaaattgcagcag
cgaatggaggcagcggtgcacgggcgtgtgccggcggcagcgctagagaaaatgacgccc
gcattcggagtggtggagcgggtgaggcagtggtggacgagggatcgagtgaataagctc
gtggagatgtctctgcccaacagacatctcgatgcattggccatcagcaacagctatggc
gtcgttcagagggacattcccaagatcatcgaggcattgctgtcgttcttggctgcggtc
gaggagtaccaagctgagatcagcaagacacatgtaaccccctcaccagaagagctacag
aacatgtctgcgaaggagaggcaggagaaagagcggctgatgactgagctcgaacaagcc
ggccagatcttcgccgaagtcaacgatgggctgaaggaaggtattgtgcacatcgtacgg
accttcggagacaagctggctgcattcaggttcccgccaaggatagcgcaaaagctacag
ggatacatgcttcacgatgatgtggtcattgttctacgtgcacaaattacagaatggcaa
ggctggggcgggatacgctcgcagaaacggcgcttatgtttggcttgtcaacaagctttt
gtaacggattcgctgctcactatctacaatatcaagtcgtttgagcgagaatgtggaggt
ttccacgactcgactcctggaacaaacttctgggatgcgacggtcaagactcggaggatc
acattcggaccgccctttaaggagacggaagggccgccgacagggaagttgagcgcagag
cggcatgtttga
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