Pleuronectes platessa (European plaice): 128442197
Help
Entry
128442197 CDS
T09923
Symbol
itga5
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5
KO
K06484
integrin alpha 5
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03266
Virion - Herpesvirus
pplt04145
Phagosome
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
pplt04517
IgSF CAM signaling
pplt04518
Integrin signaling
pplt04810
Regulation of actin cytoskeleton
pplt04820
Cytoskeleton in muscle cells
pplt05100
Bacterial invasion of epithelial cells
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
128442197 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128442197 (itga5)
04517 IgSF CAM signaling
128442197 (itga5)
04518 Integrin signaling
128442197 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128442197 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128442197 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128442197 (itga5)
04810 Regulation of actin cytoskeleton
128442197 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128442197 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128442197 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128442197 (itga5)
04515 Cell adhesion molecules [BR:
pplt04515
]
128442197 (itga5)
04090 CD molecules [BR:
pplt04090
]
128442197 (itga5)
Exosome [BR:
pplt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128442197 (itga5)
Cell adhesion molecules [BR:
pplt04515
]
Integrins
Integrin alpha subunits
128442197 (itga5)
CD molecules [BR:
pplt04090
]
Proteins
128442197 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
128442197
NCBI-ProteinID:
XP_053280494
LinkDB
All DBs
Position
6:complement(4081447..4104162)
Genome browser
AA seq
1058 aa
AA seq
DB search
MGLERFCAKTPRMAARLSRSLLCIVGLSLTLSACDAFNLDVENPAVYSGAPGSYFGYAVD
FYLANSSSASVVIGAPKASTRQVNVTEGGSVFYCPWSHNQTDCHTIDFDTKGDRTISIQD
SEQQVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDTPQSDATGTCYLSVHNFTKFVE
YAPCRTEISEAGGQGYCQGGFSADFTKDGKVVLGGPGSYFWQGQVISAAKEDIIKAYYPG
YFMQSVEGQIQTKQVHSEHDDSYQGYSVAVGEFSGDQVEGKFCAGVPKGLMLYGSVCILN
GTDLKAMINYTGEQMGSYFGYAVATTDINSDGMADLLVGAPMFMVRGSDGRLEEMGRVYV
YLQRGPLSLEPQLPHITGTEAFGRFGSTIAPLGDLNQDGFNDMAISCPFGGDDRRGLVYI
FNGYSXGLRDKPSQVIVGQWAAXMIPASFGFALRGAKDLDMNGYPDLIVGAFGVDKAVLY
RSRPIVNTSASLTIYPTMINPEEKNCIVTSGNTSVPVSCVNLSFCISADGKHLPDVLDFQ
VEVQLDSHKHKQKGGVKRALFLDSQLPVLQRSVRVRHGERVCNHTKIYLMDEKDFRDKLS
SIYVALNFSLDPSAAADSRGLRPILNYQTTHVIEQKAQILLDCGEDNICVPDLKLSVQGD
RKEVYLGDDNSLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYLT
ENQTRYLSCDLGNPMKSATSLWAGLRFTVPRLKDTHKNVQFELQIRSKNENNSHSEVVPY
KLEVVVQAEVLLQGVSRPDKVFFPPANWKVTKNYGAEQDVGPAMEHIYELVNNGPSRISH
TLLELRCPLSVQGHNLLYPLEFSTEGNINCTADKNMNHLHLKLQRTSTETPILALKAPEH
RVERRDVHRNQLAHLTNLSCSNVECWSLQCKVGLLEKGTTAIVKVRSRVWAETFMERPYK
QYVLECLARYSVEKMPYAILPKHAPSGHKKVVTPIVWNKPDIENSVPLWIIILAILAGLL
LLALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaacggttttgcgcaaagacgccgaggatggcggctcgtctctcccgctcg
ctgctgtgtatcgtcgggctctcgctcaccctctccgcctgcgacgcgttcaacttggac
gtggagaatccagctgtttacagcggagctccggggagctacttcggatatgcagtggac
ttttatttggccaattcctccagtgccagcgtggtgataggagctcccaaggccagcacg
aggcaggtcaatgtgacagaaggaggatctgtgttctactgtccgtggagccacaaccaa
acggattgtcacaccatcgacttcgacacgaaaggggatcgcactatctcaatccaggac
tcagagcaacaggttgatttcaagtcccaccaatggttcggcgccaccgtgcgctcccac
ggtgacacaatcctggcttgtgcccctctctactcttggcggactgaaaaagacaccccc
caatccgacgctacaggaacctgctacctctccgtccacaatttcaccaaattcgtggag
tacgctccgtgtcgcacagagatcagtgaagctgggggacaagggtactgtcagggtgga
ttcagtgccgacttcacaaaggatggcaaagtggtgttgggggggccgggcagctacttc
tggcaaggtcaggtgatttctgcagccaaggaggacattatcaaagcctactacccaggt
tacttcatgcagtccgtggagggtcagatccagaccaaacaggtccactccgaacatgac
gacagctaccagggctactctgttgctgttggggaattcagtggcgatcaagtggaaggt
aaattttgtgctggtgttccaaaaggcctcatgctttatggttcggtgtgtattctgaac
ggtacagatctgaaggccatgattaactacactggcgagcagatggggtcatatttcggc
tacgcagtggcaacgactgacatcaacagcgatgggatggctgacctgctggtgggagct
cccatgttcatggtgcggggctctgacggccgcctggaggagatgggccgggtctatgtc
tacctgcagcgtgggcccctgagcctggagccccagctgccgcacatcaccggcaccgag
gcgtttgggaggttcggcagcaccattgcaccactgggagacctgaaccaggatggtttc
aatgacatggccattagctgtccgtttggaggggacgaccggcggggactggtctacatc
tttaacggatactcangaggactcagggataagccatctcaggtgatcgtcggccagtgg
gctgctngaatgattcctgccagctttgggttcgctctcagaggcgctaaggacctggat
atgaatggataccctgatctcatcgttggagcttttggtgtcgataaagcagttctctat
agatctcgccccatagtgaacaccagtgcctctctcaccatctaccccaccatgatcaac
cctgaggagaagaactgcattgtcaccagcggaaacaccagcgtccctgtttcctgcgtc
aacctgagtttctgcatatccgctgatgggaagcacctaccagacgttctagatttccag
gtggaggtgcagctcgacagtcacaagcacaagcagaaaggtggcgtgaagagggctctg
ttcttggattcccagctgcccgtgctccagagaagtgtgagggtccgccacggcgagcgt
gtctgcaaccacacaaagatctacctaatggatgagaaggacttcagggataagctctcc
tccatctatgtggccttgaacttcagcttggatcccagcgctgcagccgactcccggggc
ctgcgtcccatcctcaactatcagaccacacacgtcatcgagcagaaggctcagattctg
ttggactgcggagaggacaatatctgtgttcccgacttgaagctgtcagttcaaggggac
aggaaggaagtctacctgggtgacgacaactcgctgaccttgacctttaacgccaggaac
gagggcgagggaggggcgtacgaggccgagctgtacgtggtgctgcctcctgaagctgac
tacagcggaatcgctcgcaataatgagagcctgacgcagctcacctgcagctacctgacc
gagaaccagactcgatacctcagctgcgatttgggaaacccgatgaagtctgctaccagt
ctgtgggcgggtctgcgcttcacggtgccgcggctgaaggacacgcacaagaacgtccag
tttgagctgcagatccgcagtaaaaatgagaataattcccacagtgaggttgtaccctac
aagctggaggtggtcgtccaggctgaggtccttctgcagggggtgtctcgaccagataag
gtcttcttcccgccggccaactggaaggtgaccaaaaactacggggcggagcaggacgtg
gggcccgcgatggaacacatctatgagctggtgaacaacgggcccagtcggatcagccac
acccttctggagctgcgctgccccctcagtgtccagggccacaacctcctctaccctctg
gagttctccacagaaggaaacatcaactgcaccgccgacaagaacatgaaccacctacac
ctcaaactccagcgcacgtccacagaaactccgatcctggctctgaaggccccggagcac
cgcgtggagaggagggacgtccacaggaaccagctcgcccatctgaccaacctgtcgtgc
tctaatgtggagtgctggtcgctccagtgcaaagtgggtcttctggagaaagggaccact
gccatcgtcaaagtgcgctcccgcgtctgggccgagaccttcatggagaggccttacaag
cagtatgtgctggagtgcctggccaggtacagtgtggagaagatgccctacgccatcctc
cccaaacatgcacccagtggacacaagaaggtggtgacccccatcgtgtggaacaagccg
gacatcgagaactcagttcctctgtggatcatcatcttggccattctggctggtttgctg
cttctggcgttactcatctacgttctttacaagtttggcttcttcaagcgatctctacct
tacggcacggccatggagaaagcacagctgaagccacaggccgcctccgaggcctag
DBGET
integrated database retrieval system
