Pleuronectes platessa (European plaice): 128444079
Help
Entry
128444079 CDS
T09923
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128444079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128444079
Ion channels [BR:
pplt04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128444079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF3915
Motif
Other DBs
NCBI-GeneID:
128444079
NCBI-ProteinID:
XP_053282356
LinkDB
All DBs
Position
7:5031702..5048935
Genome browser
AA seq
1350 aa
AA seq
DB search
MFNWVVKVVPQPPEAPETDEPAKTPAVPPKIKAAIPSVKSPPPKNTEEASEDSQAQTGVL
GWLSNGFVSALPQPSSSPRLSRANDSRTEDGERSGVMGWVAQGLTKVLPQPDDKYRETNT
EEHTEIYEVETMPDFDPLPHIPVVELVSEDEDEDAESLTPQFPPNVVKWIREIMPQPVIL
PPGAVMINHSPKSSRSSVDKILSPPPESLSGISIDTDSKVSHVVGWFMSGLGLKLPQPAI
APKDEIECADQVLQKASSKLKPDLVLEDVDSDNEGQHRSAPPCTSLLTPPSPTTPQQQDT
MQQTQSSSMPSQVQAEADPVPGEPSESPTKISQEDAETQTGRWTPFIESIKREAEDSAFA
TMEERLLVERVAMTRVAEEVARQAAETAVRQMASEGHSIRLSLDSAELLEEPDAEKEESL
AEDDEDPEEPVVPTLLELALKEDAEPQRTSPPPPPSPEPVKISEPEPHPEPEPEPEPESE
PEPEPEPEPDPEPVTKTQEAKSNAQPVTQQPQKAEPIGEVPDADKAAEKEEEDTGDDCGE
SSSVSIRPAVNVEDVDSDHERKGEGGGRGGGGGGGGGGGGGEEQIPIPKILTPQDPKFTT
LTVPVTPSGGRQSKGDKDSGRNHRTIWTKIRRLQSQSEDDEDEGNLPDRAWPSQSSLHST
DDVLKERPASSASQTSTVVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSIVPSPPQPA
PSGQPLDRGEKDAQEGGVESEEEEEEQARGRCNGKAPRCFLACVHYRFPASIDPFTNLMY
VLWMFLVTMAWNWNAWFIPVRWAFPYQTPDNIYYWLLIDYLCDLIYILDITIFQPRLQFV
RGGDIVSDKKDMRKNYMKTKRFKFDVASLVPLELFYFKTGINPLLRLPRLLKINSFFEFN
ERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSAYTGLGSTKWVYNGEGNSYIRCY
YFAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRTC
VDNTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSI
VSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGK
TVFVTLRAGSVFGEISLLSVGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLL
RKKARKMLTKGKKPEVKEEAKEAPLAPSAAVRPETPRLLRAALEMTERATGLRGALAEVK
EKTNKSFISLHPSIASSLPPLSPTSSSGPDRDGDTPSPVYASSASIHSLGPRSASQCCGP
ADETLATDQSEEDVCEDEGGEAEKRKGRRS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtcccccaaccccctgaagctccagaaacagatgaa
cctgccaagacccctgctgttccccccaaaattaaagcggccataccttcagtgaagagt
cctccaccgaaaaacacagaggaggcttcagaagacagtcaggcccagactggagtatta
ggctggttgtctaatgggttcgtcagcgctctgccgcagccgtccagctcccctcgactc
agccgggccaacgactcccggacagaagatggagaaaggtctggagtgatgggctgggtc
gctcagggtctgaccaaggttctgcctcagcccgacgacaagtacagagagaccaacacc
gaggagcacaccgagatctatgaagtggaaacaatgccagatttcgatcccctcccacac
atcccagtggtggagctggtgtcagaggacgaggacgaagacgcagaaagtctgaccccc
cagttccccccgaatgtggtgaaatggataagggagatcatgcctcagccagttatactg
ccccctggtgctgtcatgataaatcattcacccaagtcgtcccgctcctctgtggacaaa
attctgtctcctccacctgagtctctcagtggaatctcaatcgatactgacagcaaagtg
tcccatgtggtcggctggttcatgtccggtctgggcctgaagctgcctcagcctgcgatt
gcccccaaagatgaaatcgagtgtgcagatcaagttctacagaaagcttcatccaaactc
aaacctgacctggtcctagaagacgtggactcagacaacgagggtcagcacagatctgca
ccaccatgcacatcattgttgactcctccatcaccgacgaccccccagcagcaggacacg
atgcagcagacgcagagcagttccatgccgtcccaggtgcaggctgaggccgatccagtg
ccaggagaaccttcagagagcccgaccaagatatctcaggaagatgccgagactcagacg
ggccgctggacgccgtttattgagagcatcaagagagaggctgaagattcggcctttgct
accatggaggaacgtctgctggtggagcgcgtggcgatgacccgtgtggccgaggaggtg
gccaggcaggcggcggagacggccgtcagacagatggccagcgagggacattccatcagg
ctctcgctggacagtgcagagctgctggaggagcctgacgctgaaaaggaagagagtctt
gcagaggacgatgaagacccagaagagcctgtggtacctaccttattagaactagcgcta
aaggaggatgcagagccacagcggacgtcccctcccccccctccaagtcctgagccagtt
aagatctctgaaccagagccacatcctgaaccagaacctgaacctgaacctgaatcagaa
ccagaaccagaaccagaaccagaaccagatccagaaccagtgaccaagacccaggaagcc
aaatccaacgctcagcctgtgacgcagcagccacagaaagcagagccaatcggagaagtc
cctgatgctgacaaagctgcagagaaagaggaggaagatactggggatgactgtggtgag
agctccagcgtcagcattcgtccagccgtcaatgtggaggacgtggactcagaccatgag
agaaaaggagaaggaggaggaagaggaggaggaggaggaggaggaggaggaggaggagga
ggggaggaacagattcccatccccaaaatcctcaccccacaggaccccaagtttacaacc
ctcactgtccctgtgaccccgtctggaggtcgtcagagtaaaggagataaagatagtgga
aggaatcatcggaccatctggacaaagatcaggaggcttcagtctcaaagtgaagatgac
gaggatgaaggaaacctcccagacagagcctggcccagccagtccagcctgcacagcaca
gatgacgttctgaaagagcgtccggcgtcctcggccagtcagaccagcacggtggtgaac
gagcggctgcaggagctggtgcggatgtttaaagagagaacggagaaggccaaggagaag
ctcatcgaccctgacagctccgacgaagacagcatcgtcccctcacctcctcagccggct
ccttcagggcagccgctggacaggggagagaaggatgcacaggaaggaggagtggagagt
gaggaggaggaggaggagcaggccaggggccgctgcaatggcaaagctcctcggtgcttt
ctggcctgtgtgcactatcgtttccctgccagcatcgaccccttcaccaacctgatgtat
gtgctgtggatgttcctggtgaccatggcctggaactggaacgcctggttcatccccgtg
cgctgggccttcccctatcagacccctgacaacatttactactggctgctgatcgactac
ctgtgtgacctcatctacatcctggacatcaccatcttccagccacgtctgcagtttgtt
cgtgggggggacatcgtgagcgacaaaaaggacatgagaaagaattacatgaaaaccaaa
cgcttcaagtttgatgtcgccagcctcgttcccctggagctcttctatttcaagaccgga
atcaaccccctgctccgcttaccacggctgctgaagatcaactccttcttcgagttcaac
gagcgtctggaggccatcttgactaaagcctacatctacagggtgatccgtaccaccacc
tatcttctgtactgtctccactgtaacgcctgcctctactactggggctctgcctacaca
ggactgggttccactaagtgggtttacaatggagagggcaacagttacattcgctgctac
tactttgcggtgaagaccctgatcaccatcggaggtctccccgaccccaccaccctgttc
gagatcgtctttcaactcatcaactactttgttggagtctttgccttctctatcatgata
ggacagatgcgtgatgtggtcggtgcagccaccgcgggtcagacctactaccgcacatgc
gtagacaacactattaaatacatgtcgtcgtaccgcatccccaaagacgtccagaaccgc
gtgaagacctggtacaactacacctggcagtcgcaaggcatgctggacgagcaggagctg
ctgactcagctgccggataagatgcgtctggacattgctatagatgtcaactactccatc
gtgagcaaagtcccactgttccagggttgtgacagacagatgatctttgacatgctgaaa
agccttcgctctgtcgtctacctgccgggagactacgtctgcaagaagggtgaggtgggg
cgggagatgtacatcatcaaagcgggggaggtgcaggtggtcgggggacctgatgggaag
acggtgttcgtcactctcagagcaggatccgttttcggagagatcagtttgctttcagta
ggcgggggtaatagacgcacagccaatgtgattgctcatggatttgccaatctcttcatc
ctggacaagaaagacctgaacgagatcctggtccactaccccgagtccaagaaactgctc
cgcaagaaggccaggaagatgctgaccaagggaaagaaacctgaggtcaaagaagaagcg
aaggaggcacctctggccccgtcggctgccgtcaggccggagacgccccgactgctgaga
gccgccctggagatgaccgagagggcgactggactcagaggagctctggctgaagtcaag
gagaagaccaacaagtccttcatctcattacatccctccatcgcttcctccctgcctcct
ctgtctcccacctccagctctggacccgacagagacggggacacgccctcacccgtctat
gccagctctgcgtcaattcactctttggggcctcgctccgcatcccagtgctgcggcccc
gcagacgaaacactcgccacggaccagagcgaggaggacgtctgtgaggacgaagggggc
gaggccgagaagaggaaaggtcggaggagttag
DBGET
integrated database retrieval system
