Pleuronectes platessa (European plaice): 128456063
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Entry
128456063 CDS
T09923
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128456063 (scn1laa)
Ion channels [BR:
pplt04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128456063 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
PFF1_TM
GPHH
Lustrin_cystein
FraC
RCS1
DUF6739
Motif
Other DBs
NCBI-GeneID:
128456063
NCBI-ProteinID:
XP_053296075
LinkDB
All DBs
Position
14:complement(13796338..13821052)
Genome browser
AA seq
1984 aa
AA seq
DB search
MAQLLVPPGPDSFRPFTRESLEAIEGRIAEEKAKKPKGEKRKRKDDNGLKASGDLEAGKC
LPILYRDIPKGMVSTPLEDLDPYYANQRTFIVLNRGKKIYRLNAAPALYLLSPFNLLRRI
SIKILVHSLFNVMIMCTIITNCVFMTQTRQPEWTKNVEWTFTGIYTFEFVVKVLALGFCL
GKFTFLRDPWNWLDFTVIVMAYVTEFVDLGNLSVLRTFRVLRALKAISVIPGLKTIVGAL
FQSVKKLSDVMILTVFCLSVFALIGLQLFMGLLKQKCVRIYLNDTLDNSTEPYNMTAHLN
NASNYYYLSGKRDPLLCGTGSEAGQCPEGYNCLKVGENPDYGYTSFDSFGWAFLSLFRLM
TQDYWENLYQQTLRASGKPYMMFFVLVIFLGSFYLINLILAVVAMAYEEQSQATIKEAKE
KEEEYKAMMEQLKQQQDVQAAAILASAETGEVSDKADGTASSSDLSKLSSKSAKERRNRR
KKRKEEEGKDDEEKLPKSESQDSIKKGRCRFSVEANLLDYDMKCSSAHQSFLSFRGPLFS
PRRNSRTSIFSFRSQAQDVSSENEFADDESSIFEDDLSQRGSLFLPRRFDRRSSSMSQCS
YLSHRLFPPSGIKRSSVDCNGVVTLVGGNSLPSSPVALRLPKVTLDTAPDANADTTDTGY
IQATRGPNQDFIDFPDGPEARQRAHSTVSVITSTMEELEESRQKCPPCWYKFANIFLIWE
CCPFWLEIKKLVKLIVMDPFVDLAITICIVLNTLFMAMEHYPMSDEFSDMLIVGNKVFTG
IFTAEMVVKIIALDPYNYFQKGWNIFDGIIVTASLLEVCLANVVGMSVLRSFRLLRVFKL
AKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISTDCTL
PRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGKTKCLVVYMMVMVIGNLVVLNLFLA
LLLSSFSADNLAAQEVVGEVNNLQIAIDRIHRGIAFAKSMLQSSCNSICLRDKKKAKSED
KSLDELNKPMGPNGVPNHTIKDFPKNGNGDVTGVDKNGDKYIVSSRSDDSIMSFINNPSL
TVTVPIAVGESDFEYLNTEDISTASSEPAGCPVIVEDDGQLSTSEGSTVDGFGAGEGECL
DSDLQECMDPDGCFPEVCVKRFKCCQVKVDVGWWKVWWTLRKTCYRIVEHNWFESFIIFM
ILLSSGALAFEDVYIEKKKTIKTMLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWL
DFLIVDVSLVSMVANLMGYSEFGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSI
FNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNRTSNKRFPSSIVNNQSQCEALLKVARWKN
VKINFDNVGMGYLALLQVATFKGWMDIMFAAVDSRSKAGDQPEYENSMIMYLYFVVFIIF
GAFFALNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSSK
IQGYVFDFTTKQAFDIVIMVLISLNMVTMMVETEDQSEEKKIVLGKINIVFICIFSGECL
LKMISLRHYFFTNGWNIFDFIVVILSIIGCFLTDIIEKYFVSPTLFRVIRLARIGRVLRL
IKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRESGIDDLFNFET
FGNSMICLFQITTSAGWDGLLAPMLNKNEDCNATMEHPGSNVKGNCGKPAVGITFFVSYI
IICFLIVVNMYIAVILENFGVATEESTDPLSEDDFEMFYEVWERFDPHVSQFMEYRMLSD
FADDLDPPLRIAKPNKLELMSMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRGQME
ERFMASNPSKVSYEPITTTLRRKHEEVSAVVIQRAYRLYAKNNPASKPSDAPGDDIQKSD
TLIDNEEVITDELKRKSSTDKGELAPSSASQLSCDGVTTNGNNKYEKDKSEKEVEGKDVQ
EQDK
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggtccagacagcttccgccccttcacccgcgaatcc
ctcgaagccattgagggaaggattgcggaggagaaagccaagaagcccaagggcgaaaag
agaaaacgcaaagatgacaacgggctcaaggccagcggcgacctggaggccggcaaatgt
ctccctattctgtatcgggacattcctaaaggcatggtgtcgactccactggaggacctg
gatccatactacgctaatcagagaaccttcatagtattaaacagaggaaagaaaatctac
cgcttaaacgccgcacctgccttgtacctcctgagccctttcaaccttctaagaagaata
tcaatcaagatcttggtacactcattgttcaacgtgatgatcatgtgcaccatcatcacc
aactgtgtatttatgacgcagaccagacagcctgagtggacaaagaatgtggagtggacg
ttcactggcatctatacctttgagttcgtcgttaaagttttagccctagggttctgttta
ggaaagttcacgtttctcagagatccctggaactggctggatttcactgtcattgttatg
gcgtatgtaacagagtttgtggacctgggcaatttatcagttcttcgcacgttcagagtg
ctcagagctctcaaagctatttcagttatcccaggcctgaagaccattgttggtgcgttg
ttccagtcagtgaagaagctttccgacgtgatgatccttactgtcttctgcttgagcgtc
ttcgccctcatagggttgcagttgttcatgggtctcttaaagcaaaagtgtgtccggatt
tacttaaacgacacattggacaactcgacagaaccgtacaacatgacagctcacctgaat
aatgccagtaattattattacctttctggcaagagagatccactgctttgtggaactggc
agtgaagctgggcagtgtccggagggttacaactgcctgaaagtgggagagaacccagac
tatggctacaccagttttgactcttttggttgggccttcctctcactgttcagactgatg
acacaagactactgggaaaacctttatcaacagactctgcgtgcatcagggaagccctac
atgatgttttttgtgctggtgatattcctcggctccttctacctgatcaacctgatcttg
gctgtagtggccatggcctatgaggagcagagccaggccaccatcaaggaggccaaggag
aaggaggaggagtacaaggccatgatggagcagctgaaacagcagcaggacgttcaggca
gcagcaatcctagcttctgctgagaccggggaggtcagcgacaaagctgacggcactgcg
agctcctccgatttatccaagctcagttccaaaagtgccaaagagagacgcaacaggcgg
aagaaaagaaaggaggaggagggcaaagacgacgaagagaaacttcctaagtcggagtcg
caggacagtataaagaagggtcgctgccgtttctccgtggaggcaaacctgctcgactat
gatatgaagtgttcgtccgcacatcagtcctttctgagtttccgtggacccctcttctca
cccagacggaacagcaggaccagcattttcagtttccgaagccaagcgcaggacgtgagc
tccgagaacgagtttgccgatgacgagagcagtatttttgaggacgaccttagtcaaaga
ggctctttattccttccgcggaggtttgatcggcgcagcagcagtatgagtcaatgcagc
tacttgtcgcatcgcctctttccacccagcgggatcaagcgcagctcagtagactgcaac
ggggtggtgactctagtgggcgggaattctctcccgtcttcacctgttgcgcttcgtctg
cctaaagtgacactagatacagcccccgacgcaaacgctgacaccactgacacagggtac
atccaggccaccaggggaccaaaccaggactttattgacttcccagacggcccagaggcc
agacagagagcccatagtacagtcagtgtcataaccagcaccatggaggagcttgaagag
tccaggcagaagtgtcctccttgctggtacaaatttgccaacatcttcctcatctgggaa
tgttgtccattctggctagagatcaagaagttggttaaattaattgtcatggacccattt
gtagaccttgccatcaccatctgcattgtactcaacacattgtttatggccatggagcat
tatccaatgtccgatgagttttccgatatgctgattgtgggcaacaaggtattcaccggt
atcttcactgcggaaatggtcgtcaagatcattgcgttggacccatacaattactttcag
aaagggtggaatatctttgacggaattattgtcactgcaagcttgctggaggtgtgtttg
gcaaatgtggttggcatgtcggttctgaggtccttcagactgctgagagtgttcaagttg
gctaaatcatggcccactctcaacaaactgattaaaataattggtaactcagtgggggca
ctgggcaacctgacccttgtactggccattatcgtcttcatctttgccgtggtgggcatg
cagctgtttggaaaaagctacaaggactgtgtgtgtaaaatctctactgactgcactctg
ccccgttggcacatgaacgacttcttccattcattcctcattgtgttccgagtgctttgt
ggagagtggatagagaccatgtgggactgtatggaggtggctgggaagaccaagtgcttg
gttgtctacatgatggtcatggttattggaaacctggtggtgttgaatctgttcctggct
ctgctgctgagctcattcagtgccgacaacctggcagcacaggaagttgtcggcgaggtc
aacaatttgcagattgcaattgatcggattcacaggggcatagccttcgccaagtccatg
ctccagagcagctgcaacagcatctgtctcagggataagaagaaagcaaagagtgaagac
aaatctctggatgagctcaacaaacctatggggccgaacggcgtccccaaccacaccatc
aaagacttccctaagaatggcaacggggacgtgaccggggtggacaaaaatggagacaag
tacatcgtcagcagcaggagcgatgattctataatgtctttcatcaacaatcctagtctg
accgtcactgtccccatcgctgtgggcgagtctgactttgaatacctcaacacggaggac
atcagcactgcctcgtctgaaccggcaggatgccctgtgattgtagaggacgacgggcag
ctcagcacctccgagggcagcaccgtggacggttttggggctggggagggagagtgtctt
gactccgacctacaggaatgtatggatcctgatggctgctttcctgaagtctgtgtgaag
aggttcaagtgttgtcaggtgaaagtagacgtgggctggtggaaggtgtggtggacgcta
agaaagacctgttatcggatagtggagcacaactggttcgagagcttcatcatcttcatg
atcctgctcagcagtggagctctggcgtttgaagatgtctacattgagaagaagaagacc
attaaaaccatgttggagtttgcagacaaaatcttcacctacatcttcattcttgagatg
ctgttgaagtgggtggcatatggctttgccaaatacttcaccaatgcctggtgctggctg
gacttcctcattgttgacgtgtcactggtcagcatggtggccaacctcatgggatattct
gaattcggtgccattaagtctctgagaaccctgcgagcattgaggcccctgagagccttg
tcacgattcgagggcatgcgggtggtggtcaatgccctgctgggagccatcccttccatc
ttcaacgtgctgctcgtatgtctcatattttggctcatcttcagcatcatgggagtcaac
ctgtttgcggggaagtactaccattgtgtcaacagaacctcgaataagcgtttcccttca
tcgattgtgaataaccagtcacaatgtgaggccctcctcaaagtggctcgctggaagaat
gtcaaaatcaactttgacaatgttggtatgggttacctcgcactgctgcaagtagctaca
tttaagggctggatggatatcatgtttgctgctgtggactctcgatccaaggcaggggat
caacctgagtatgagaacagcatgattatgtacctgtactttgttgtcttcatcatcttt
ggagccttcttcgcactcaatctcttcattggtgtcatcatagacaatttcaatcagcaa
aagaaaaagtttggaggtcaggacatcttcatgactgaagaacagaagaaatactacaat
gccatgaaaaagctgggctcaaagaaaccacaaaagcctattcctagaccatcgagcaag
attcaaggatacgtctttgacttcaccacaaaacaagctttcgatattgtaataatggtt
ctaatatcgctcaatatggtcaccatgatggtggaaaccgaggaccagtcagaggaaaag
aaaatcgttctcggaaaaattaatattgtcttcatttgcatcttcagtggagaatgtttg
ttgaagatgatctctctccgacattactttttcacaaatggttggaatatatttgatttc
atcgtggtcatcctttcaatcattggttgcttcctcaccgatattatagagaagtatttt
gtttcgccaaccttgttcagagtcatccggttggctcgcattgggcgtgtcctccgcctt
attaaaagcgccaaaggaatccgcacactcttgtttgccttgatgatgtcacttcctgcc
ttgttcaacatcggtctcctgctcttcctggtgatgtttatctacgccatcttcggcatg
tcgaactttgcttacgtcaagagagagtcaggcattgacgaccttttcaattttgagacg
tttggaaacagcatgatctgcctgttccagatcaccacgtcagcggggtgggacggccta
ctcgctcccatgctcaacaaaaacgaggattgtaatgcaaccatggagcatcctggcagc
aatgttaaaggaaactgcggaaagcctgctgtggggattactttcttcgtgagctacatc
ataatctgtttcttgattgtggtgaacatgtacattgctgtcatcctggaaaacttcggc
gtggccaccgaggagagtacggacccactgagcgaggatgattttgaaatgttctatgag
gtgtgggaaaggttcgatcctcatgtgtcacaattcatggagtacaggatgctgtccgac
tttgccgacgacctggacccgccgttgcgcatagccaagcctaacaagctcgagctcatg
tccatggatctacccatggtgagcggcgaacgcatccactgcctggacatcctgtttgca
ttcacaaaacgtgttctcggtgagggtggggagatggatatcctgagggggcagatggag
gagcgcttcatggcctccaatccctccaaagtgtcctacgaacccatcaccaccacgctc
cgccgcaagcacgaggaagtgtctgccgtcgtcatccagcgagcgtacagactgtatgca
aagaacaatcctgccagtaagccctctgacgcacccggtgatgacattcaaaagagtgac
acgctcattgacaatgaggaggtcatcacagacgaactgaaaagaaaatctagcactgat
aaaggcgaactagccccgtcgtctgcctctcaactgtcgtgcgacggcgtgacgacaaac
gggaacaacaaatatgaaaaggacaaaagtgaaaaggaggtggaaggcaaagatgtccaa
gagcaagataaatga
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