Paenibacillus polymyxa SC2: PPSC2_18545
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Entry
PPSC2_18545 CDS
T01335
Symbol
pel1
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00040
Pentose and glucuronate interconversions
ppm01100
Metabolic pathways
ppm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PPSC2_18545 (pel1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSC2_18545 (pel1)
Enzymes [BR:
ppm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PPSC2_18545 (pel1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ADO57927
UniProt:
E3E5Q0
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Position
4161430..4162713
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AA seq
427 aa
AA seq
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MKKRCSLGIAAVLLFATLAPMGAPAHAASDIGKETLGSKNGWAAFSTGTTGGAAATSSNT
FTVTNRKQLVDALGKSSNTTPKIIYVKGTINANVDDNNKPLGLNDYKDSKYDFNAYLKAY
DPSTWGKKVPSGTLEDARKASQKNQASRIVIEIPSNTTIVGLGNNAVINGANFQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDSITINGATHVWVDHNTFNDGAHPDSG
NGTFYGQEYQHHDGLLDVINQGDLVTISYNHFYDHDKTSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPTLYIWGAGKASKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTLLNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKTEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagatgttcactcggaatcgcagccgtgttattgttcgctactctggctcct
atgggtgcacctgctcatgcagccagcgatattggcaaggagacactcggcagcaaaaac
ggctgggccgccttttctactggcacaacaggtggagctgctgctacttcctccaatact
ttcaccgtaacgaaccgtaaacaacttgtcgatgcgttaggcaagagcagcaacactaca
cctaaaattatttatgtcaaaggtacaatcaatgctaacgtcgatgacaataataaacca
ttaggattgaacgattacaaggactctaagtatgatttcaatgcgtatctcaaggcgtat
gatccgtctacatgggggaaaaaggttccttctggtacattggaagatgcacgtaaggca
tcacagaagaatcaagccagtcgtatcgttattgaaattccatccaatacaacgattgtc
ggtctgggcaacaatgccgtcattaatggtgcaaacttccaattaaaaaagggtacagac
aacgtcattatccgtaatattgagtttcaggatgcctacgattatttcccacaatgggac
ccaactgatggcagtacaggcaattggaattcagaatatgacagcattacaattaacgga
gccacgcatgtatgggtggatcacaatacgttcaatgacggggctcaccccgatagcgga
aacggcaccttctacggtcaagaataccagcatcatgatggactgctcgatgtgattaac
caaggtgatctggttaccatttcatacaatcacttttacgatcatgacaaaacatccatt
atcggcaacagcgacagtaaaacagcggatgaaggggctttacgtgtaaccctgcatcac
aattattatgagaatacagtacaacgcacaccgcgcgtacgttatggacaagtccatcta
tataacaattactatacaggtgatgtaaaacgctctgaataccctacactgtatatatgg
ggcgcgggcaaagcctctaaaatctttgctgaaaacaatgtcattgacgttgcgggactg
tccgcagccaaaattgtgactgtttttggtggaactgccctgtcagacactggcacactt
ctgaatggacaggccgtaaacgcaggctccagcgcggggcttagctcctctgtaggctgg
aagccatccttgaacgataaaatttccccatccgccagcgtgaagacagaagtcacttcc
caagccggttccggcaagttgtaa
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