Pandoraea pnomenusa DSM 16536: LV28_22160
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Entry
LV28_22160 CDS
T03411
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00630
Glyoxylate and dicarboxylate metabolism
ppnm00680
Methane metabolism
ppnm01100
Metabolic pathways
ppnm01120
Microbial metabolism in diverse environments
ppnm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LV28_22160
09102 Energy metabolism
00680 Methane metabolism
LV28_22160
Enzymes [BR:
ppnm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LV28_22160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer4_6
Fer4_10
Fer4_Nqo3
Fer4_9
Fer4_15
Fer4_2
Fer4_NDSU1
Fer4_4
Fer4_8
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
AIU28916
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All DBs
Position
3719741..3722641
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AA seq
966 aa
AA seq
DB search
MCRPRPPRRPPIMMDPMFEKDYGTPRRESTQEVTLEIDGEQVTVPAGTSIMRAAAEGGVN
VPKLCATDSLEPFGSCRLCLVEIEGRRGFPASCTTPVEPGMKVRTQSPKLQELRKGVMEL
YISDHPLDCLTCAANGDCELQDMAGVTGLREVRYGFDGANHFDSEKDESNPYFTYDASKC
IVCNRCVRACEETQGTFALTISGRGFEARVSAGQDQPFMESECVSCGACVAACPTATLQE
KSVIHLGQAEHAKITTCAYCGVGCSFKAEMKGNEVVRMVPHKDGQANEGHACVKGRFAWG
YATHKDRILTPKIRKKITDPWQEVSWDEALDYAASEFKRIQAKYGRDSIGGLVSSRCTNE
EDYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKATLGESAGTQTFKSVEHSDVILVMGA
NPTDGHPVFGSRMKKRLRQGAKLIVIDPRRIDLVQSPHIKADYHLQLRPGTNVAMINALA
HVIVTEGLMADEFIAERCEDRAFNQWRDFIARAENSPEATEAHTGVPAHLVRGAARLYAT
GGNAAIYYGLGVTEHAQGSTTVIGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGAF
PHELPGYRHVSDSTARALFEAEWGVELQAEPGLRIPNMFDAALAGTFMGLYCQGEDIVQS
DPNTQHVTHALEHMECIVVQDIFLNETAKYAHVLLPGSSFLEKDGTFTNAERRISRVRQV
MPPRAGYADWEVTIQLAKRLGYEMNYSHPSEIMDEIARLTPTFTGVSYEKLDRVGSVQWP
CNENAPDGTPVMHIDEFVRGKGKFLITQYVPTDEKVTKRFPLILTTGRILSQYNVGAQTR
RTANNHWHDEDRLEIHPHDAEERGVKDGDWVGIQSRAGETVLRAVVSDRMQPGVVYTTFH
FPESGANVITTDNSDWATNCPEYKVTAVQVSPVAQPSEWQRQYSDFNRQQEAFHDHAVAA
AQASTN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atctgccgaccaaggccgcctaggagaccgcccatcatgatggacccgatgtttgagaag
gattacggcaccccgcgccgcgaatcgacgcaggaagtcacgctggagatcgacggcgag
caggtcaccgtgcccgccggcacctcgatcatgcgtgccgccgccgaaggcggcgtcaac
gttccgaagctgtgcgccaccgactcgctcgagccgttcggctcgtgccgcctgtgcctc
gtggaaatcgaaggccgccgcggcttccccgcgtcgtgcaccacgccggtcgagcccgga
atgaaggtgcgcacgcaatcgccgaagctccaggaattgcgcaagggcgtgatggagctg
tacatctccgatcacccgctcgactgtctgacctgcgcggccaacggcgattgcgaactg
caggacatggccggcgtgacaggcctgcgcgaggtgcgctacggcttcgacggcgccaat
cacttcgacagcgagaaggacgagtcgaacccctacttcacttacgacgcctccaagtgc
atcgtctgcaaccgctgcgtgcgggcctgcgaagagacccagggcaccttcgccctgaca
atctcgggtcgtggcttcgaagcgcgcgtgtcggcgggtcaggaccagccgttcatggag
tcggagtgcgtgtcgtgcggcgcgtgcgtggccgcctgcccgaccgccacactccaggaa
aagtccgtcattcatctcggccaggccgagcacgccaagatcacgacctgcgcctattgc
ggcgtgggctgctcgttcaaggcagaaatgaagggcaatgaggtcgtgcgcatggtgccg
cacaaggacggtcaggccaatgagggccacgcctgcgtgaaaggccgcttcgcctggggc
tacgccacgcacaaggaccgcattctcacgcccaagattcgcaagaagatcaccgatccg
tggcaggaagtgtcgtgggacgaggcactcgactacgcggcgtccgaattcaagcgcatt
caggccaagtacggccgcgactccatcggcggcctggtgtcctcgcgctgcacgaacgag
gaggactacctcgtgcagaagctggtgcgcgcggcgttcggcaacaacaacgtcgacacc
tgcgcacgcgtttgtcactcgcccaccggctatggcctgaaggccacgttgggcgagtcg
gccggcacgcagacattcaagtccgtcgagcattcggacgtgatcctcgtgatgggtgca
aacccgacggatggtcacccggtattcggctcgcgcatgaagaagcgtctgcgtcagggc
gccaagctgatcgtgatcgacccgcgtcgcatcgatctggtccaaagcccgcacatcaag
gccgactaccatctgcaactgcgccccggcaccaacgtggcgatgatcaatgccctggcg
cacgtgatcgtcaccgaagggctcatggccgacgagttcatcgccgagcgctgcgaagat
cgcgcgttcaaccagtggcgcgacttcattgcgcgcgccgagaattcgcccgaagccacc
gaagcgcataccggcgtgcccgcgcatctcgtgcgcggcgccgcacgcctttacgccacc
ggcggcaacgcggcgatctactacggcctcggtgtgaccgagcacgcgcaggggtcgacg
accgtgatcggcatcgccaacctggccatggccacgggtaacatcggccgcgaaggcgtg
ggcgtgaatccgttgcgcggccagaacaacgtgcagggctcgtgcgacatgggcgccttc
ccgcacgaattgccgggctatcgtcacgtgtcggattcgaccgcgcgggcgctgttcgag
gccgaatggggcgtcgagctgcaagccgagccggggctgcggattccgaacatgttcgac
gccgcgctcgcgggcaccttcatgggcctgtactgccagggcgaggacatcgtgcagtcc
gacccgaacacgcaacacgtcacgcacgcgctcgagcacatggagtgcatcgtcgttcag
gacatcttcctgaacgaaaccgccaagtatgcgcacgtactgctgccgggctcgtcgttc
ctcgagaaggacggcacgttcaccaacgccgagcgccgcatctcgcgcgtgcgtcaggtc
atgccgcctcgcgccggttacgccgactgggaagtgacgattcagctcgccaagcgcctg
ggctacgagatgaactactcgcacccgtcggagatcatggacgagatcgctcgccttacc
cccacgttcaccggcgtgagctacgaaaagctcgatcgcgtgggcagcgtccagtggcct
tgcaacgagaacgcgcccgacggcacacccgtcatgcacatcgacgagttcgtgcgcggc
aagggcaagttcctgatcacgcagtacgtgccgaccgacgagaaagtgaccaagcggttc
ccgttgatcctcacgaccggccgcatcctgtcgcagtacaacgtgggggcacagacccgc
cgcacggccaacaaccactggcacgacgaggaccgactcgagatccatccgcacgatgcc
gaggagcgcggcgtgaaagacggtgactgggtcgggatccagagccgggcgggcgagacg
gtactgcgcgccgtggtgagcgaccgcatgcagccgggcgtggtgtacacgacgttccac
ttcccggaatcgggggcgaacgtcattaccaccgacaactccgactgggcgacgaattgc
cccgagtacaaggtcacggcggtgcaggtctcgccggtagcgcagccgtcggagtggcag
cgccagtattcggacttcaatcgccagcaggaagcgttccacgatcatgcggtcgcggcg
gcgcaggccagtaccaactga
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