Pandoraea pnomenusa RB38: DA70_17015
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Entry
DA70_17015 CDS
T03067
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00260
Glycine, serine and threonine metabolism
ppno00630
Glyoxylate and dicarboxylate metabolism
ppno00785
Lipoic acid metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01200
Carbon metabolism
Module
ppno_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DA70_17015
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DA70_17015
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DA70_17015
Enzymes [BR:
ppno01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DA70_17015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
FANC_SAP
Aminotran_1_2
BaxI_1
Motif
Other DBs
NCBI-ProteinID:
AHN75965
UniProt:
A0A378YN49
LinkDB
All DBs
Position
complement(5210163..5213090)
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AA seq
975 aa
AA seq
DB search
MNALTDLQAPRRSLTELEQRENFSARHIGPDTPEQQAMLTELGYASRAALIDAVVPASIR
RDGERFAASLGQFAAAKTESQALAQLRALADQNQVFKSFIGQGYYNTFTPGVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIIDMTGLAIANASMLDEATAAAEAMTLVKRTG
KSKSNTFFVADDVLPQTIEVVQTRAKPLGIEVQVGPVAAAAEVEAFGVLVQYPGVGGDVR
DFRALADTIHAKGGMLVAAADLLSLALLTPPGEWGADVAVGNSQRFGVPMGFGGPHAAYL
ATRDELKRSMPGRLVGVSVDSQGKPALRLALQTREQHIRREKATSNICTAQALLAIMASM
YAAYHGPQGLRVIAERVHRLTAVLAAGLAALGAAPRNATFFDTLTVPVAGRADSIHTVAA
ARRFNLRREDADTVGISLDETSTRDDVIALWEVVAEGLGKQAVSLDFDAIEATVSNGYPA
ALARQSAYLTHPVFNRYHSEHEMLRYLRSLSDKDLALDRTMIPLGSCTMKLNATSEMLPV
TWPEFGQIHPFAPADQTVGYRTMIDQLERMLVAATGYAAVSLQPNAGSQGEYAGLLIIQA
YHASRGEAHRDICLIPASAHGTNPASAQMAGMQVVVVACDANGNVDLADLQAKAEQHRDR
LAAIMMTYPSTHGVFEAGARQICEIVHANGGQVYVDGANMNAMVGLCAPGEFGGDVSHLN
LHKTFCIPHGGGGPGVGPVAVGAHLAKFLPNQRSTGYSRDAEGIGAVSGAPYGSASILPI
SWMYVAMMGAKGLTAATETAILNANYLAKKLAPHYPVLYTGPGGLVAHECILDLRPLKDT
SGITVDDVAKRLMDFGFHAPTMSFPVPGTLMVEPTESESKHELDRFIEAMVTIREEIRAV
EEGRADREDNPLKHAPHTADVVTADEWTHAYARSQAAYPVKALRERKYWPPVGRADNVYG
DRNLFCACVPMSDYE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttgactgacctgcaagcgccgcgccgctcgctcaccgagctcgagcagcgc
gagaacttctccgcgcgccacatcggcccggacacccccgaacaacaagccatgctcacc
gagctgggctatgcctcgcgcgccgcgttgatcgacgcggtcgtgccggcttcgatccgc
cgcgacggcgagcgcttcgccgcatcgctcggccagttcgccgccgcgaagaccgagtcg
caggcacttgcgcaattgcgcgcgctggccgaccagaaccaggtcttcaagtcgttcatc
ggtcagggctactacaacaccttcacgccgggcgtgatcctgcgcaacgtgctggagaac
ccggcctggtacacggcttacaccccgtatcagccggaaatctcgcagggccgcctcgaa
gcgctgctcaattaccagcagatgatcatcgacatgacggggctggcgatcgccaacgcg
tcgatgctcgacgaggcgaccgccgccgccgaagcgatgacgctggtcaagcgcaccggc
aagtcgaagtccaacacgttcttcgtggcggacgatgtgctgccgcaaaccatcgaagtg
gtgcaaacgcgcgccaaaccgctcggcatcgaagtccaggtcggtcccgtggccgccgcc
gccgaagtcgaggcgttcggcgtgctggtgcaatacccgggcgtgggcggcgacgtgcgc
gatttccgcgcgctggccgacacgatccatgcgaagggcggcatgctggtcgccgccgcg
gacctgctctcgctcgcgttgctcacgccgccgggcgagtggggcgccgacgttgccgtc
ggcaacagccagcgcttcggcgtgccgatgggcttcggcggcccgcacgccgcctacctg
gccacgcgcgacgaactcaagcgctcgatgcccggtcgtctggtcggcgtgtcggtcgac
tcgcagggcaagccggcgctgcgattggcgctgcaaacgcgcgagcagcacatccgccgc
gagaaggccacctcgaacatctgtaccgcgcaggcgctgctcgccatcatggccagcatg
tacgccgcgtatcacggcccgcagggcctgcgcgtcatcgccgagcgcgtgcaccgtctg
acggccgtgctggctgccggtcttgccgccctgggcgccgcgccgcgaaacgccacgttc
ttcgacacgctgaccgtgccggtggccggccgcgccgacagtattcacaccgtggccgcc
gcccgccgcttcaacctgcgtcgcgaggacgccgatacggtcggtatctcgctcgacgag
accagcacgcgcgacgacgtgatcgcgttgtgggaagtggtcgcagaggggctcggcaag
caagccgtctcgctggacttcgacgccatcgaagccaccgtctcgaacggttatccggcg
gcgctcgcgcgccagagcgcgtatctcacgcatccggtgttcaatcgctatcactccgag
cacgaaatgctgcgttacctgcgcagtctctcggacaaggatctggcgctcgatcgcacg
atgatcccgctcggctcgtgcacgatgaagctcaacgccacctcggagatgctgccggtg
acgtggccggaattcggccagattcacccgttcgccccggccgaccagacggtgggctac
cgcaccatgatcgaccagctcgagcgcatgctcgtggccgcgaccggctatgcggcggtg
tcgttgcagccgaacgccggctcgcagggcgagtacgcaggcctgctgatcattcaggcg
tatcacgcctcgcgcggcgaagcgcatcgcgacatctgcctgatcccggcgtcggcgcac
ggtaccaacccggcatcggcccagatggcgggcatgcaggtcgtggtggtcgcgtgcgat
gccaatggcaacgtcgatctggccgacctgcaggcgaaggccgagcagcatcgcgaccgc
ctggccgcgatcatgatgacgtacccgtccacgcacggcgtgttcgaggcgggcgcgcgc
cagatctgcgaaatcgtgcatgcgaacggcggccaggtgtatgtcgacggcgccaacatg
aacgcgatggtcggcctgtgcgcacccggcgaattcggtggcgacgtgtcgcacctgaac
ctgcacaagacgttctgcattccgcacggcggcggcggccccggcgtggggccggtcgct
gtcggcgcccatctggcgaagttcctgccgaaccagcgttcgaccgggtattcgcgcgat
gccgaaggtatcggcgccgtgtcgggcgctccgtacggttcggcctcgatcctgccgatc
tcgtggatgtatgtggcgatgatgggtgcgaagggcctgacggccgccaccgaaaccgcc
attctcaacgccaactacctcgcgaagaagctcgcgccgcactacccggtgctgtacacc
gggccgggcgggctggtggcgcacgagtgcattctcgacctgcgtccgctcaaggacacc
agcggcatcaccgtcgacgacgtggccaagcgactgatggatttcggcttccatgcgccg
acgatgagcttcccggtgccgggcacgctgatggtcgagccgacggaatcggagtcgaag
cacgaactcgaccgcttcatcgaggcgatggtcacgatccgcgaggaaatccgcgcggtg
gaagagggacgcgcggaccgcgaggacaatccgctcaagcacgcgccgcacacggccgac
gtggtgaccgccgacgaatggacgcacgcctacgcgcgcagccaggcagcgtatccggtc
aaggcgctgcgcgagcgcaagtactggcctccggtcggacgcgccgacaacgtgtatggc
gaccggaacctgttctgcgcctgcgtgccgatgagcgactacgagtga
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