Pandoraea pnomenusa RB38: DA70_17985
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Entry
DA70_17985 CDS
T03067
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DA70_17985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppno03021
]
DA70_17985
03400 DNA repair and recombination proteins [BR:
ppno03400
]
DA70_17985
Enzymes [BR:
ppno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DA70_17985
Transcription machinery [BR:
ppno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DA70_17985
DNA repair and recombination proteins [BR:
ppno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DA70_17985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AHN76128
UniProt:
A0A378YPQ0
LinkDB
All DBs
Position
complement(4995465..4996442)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVEPVGEHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTMDGVEEDVVNFLLNLKGVVFKLHNRDEVTVTLRKDGEGVVRASDIEVPHDVEL
INPDHVIAHLAKGGKLDVQIKIEKGRGYVPGNVRRYGDESAKVIGRIVLDASFSPVKRVS
YAVESARVEQRTDLDKLVMNIETNGVVSPEEAIRQSARILVDQLSVFAALEGTEAASEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcattgcggttgagccggtcggcgagcatcac
gccaaagtcgtgatggagccgttcgaacgtggctatggccacaccttgggcaatgcgctt
cgccgcgtgctgttgtcgtcgatggtgggctacgcgccgaccgaagtgacgatcgccggc
gttgtgcacgagtattccaccatggatggtgtcgaggaagatgtcgtcaacttcctgctg
aacctcaagggtgttgtgttcaagctgcataaccgtgacgaagtcaccgttacgctgcgc
aaggatggtgaaggtgtggtgcgcgcttcggatatcgaagtgccgcatgatgtggaactc
atcaaccccgatcacgtgatcgcgcatctggccaagggcggcaagctcgacgttcagatc
aagatcgagaagggtcgtggttatgtcccgggtaacgttcgtcgttatggcgacgagtcg
gccaaggtgatcggccgcatcgttctcgatgcgtcgttctcgccggtcaagcgtgtgagc
tatgcggtcgagtcggcccgtgtggaacagcgcacggacctggacaagcttgtgatgaac
atcgagaccaacggtgtggtgtcgccggaagaagcgatccgtcaatcggcccgcattctg
gtggatcaactgtcggtgttcgctgcgctggaaggcacggaagccgccagcgaagcgccg
tcgcgtgcgccgcagatcgatccgatcctgctgcgtccggtggacgatctcgagctgacg
gtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctgatccag
cgtaccgagaacgaattgctcaagaccccgaacctgggtcgcaagtcgctcaacgaaatc
aaggaagtccttgcctcgcgtggtctcacgctgggcatgaagctcgaaaactggccgccg
gccggtctcgagaagtaa
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