Paenibacillus polymyxa M1: PPM_1377
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Entry
PPM_1377 CDS
T01968
Symbol
metC3
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00270
Cysteine and methionine metabolism
ppo00450
Selenocompound metabolism
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
ppo01230
Biosynthesis of amino acids
Module
ppo_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PPM_1377 (metC3)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PPM_1377 (metC3)
Enzymes [BR:
ppo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
PPM_1377 (metC3)
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
GDC-P
FCH
SelA
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CCC84314
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All DBs
Position
1648114..1649292
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AA seq
392 aa
AA seq
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MIEDARKIGEDLDKGRKFATKLLHFGSEIDSVTGASSVPIYQASTFHHHDIFNPPQHDYS
RSGNPTRQALEDYIALLEGGACGFAFASGMAAISTTFMLLSAGDHVIVSEDVYGGTYRLL
TSILKRMNIETTFVDMTDLNLVKEALQENTRAVYMETPSNPTLKITDVAGITSWARDNGL
LTLLDNTFMTPYYQRPIEQGVDIVLHSATKFLGGHSDVLAGLAVARTESLGRQIKQLQNG
LGTVLAPQESWLLMRGMKTLEARMAHSEKSAAKLANWLNERNDIEAVYYPGLENHPGRAV
HESQSSGYGAVISFDVGSGERAKEVLSRVRIPIVAVSLGAVESILSYPAMMSHAAMPQSV
RLERRITDGLLRFSVGLEDIDDLIRDLDEALR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggatgcgaggaagatcggagaggatctggacaaagggcggaaattcgcaacc
aagctgctgcattttggctctgaaattgacagtgttacaggggcatcgagtgtcccgatc
tatcaagcttcgacctttcaccatcatgatatttttaatcctccgcagcatgattatagc
cgttcaggtaatccgacacgacaagctttagaagattatatcgcattattagaaggcgga
gcttgcggttttgcctttgcctctggtatggctgctatctccactacatttatgctctta
tcggctggtgatcatgtcattgtttcggaggacgtatatggaggaacatatcgactgctg
acctccatcttgaaacggatgaatatcgaaacgaccttcgttgatatgacggatctcaac
cttgtgaaagaggcgttgcaggagaatacaagggctgtgtatatggaaaccccctctaat
ccgacactcaaaattaccgatgtggcaggaataacctcttgggcaagagataatgggctg
ttgacgttattggataatacttttatgacaccttattatcaacgtccgattgagcaggga
gtcgatattgtattgcacagtgcgaccaagtttttaggtggacacagtgatgtactggca
ggacttgcggtagctcgtactgaatcattggggagacaaatcaagcagctgcagaatgga
ttgggtaccgtgctggctccgcaagagtcttggttgcttatgcgtgggatgaagacactg
gaagcgcgtatggctcacagcgaaaaaagtgcagctaagcttgcaaactggctaaacgag
cgcaatgacattgaagcggtatactatccgggtttggagaaccatccagggcgtgcagtt
catgagagtcaatcgagcggttatggtgcagtgatatcgtttgatgtgggttctggtgag
cgtgcaaaagaggtcctcagtcgtgtacgtattcccattgtggcggtgagtctgggagct
gtggaaagtatcttgtcgtacccagcaatgatgtcacatgcggctatgccgcaaagtgta
cggttggagcgcaggattacggacggtctactccgtttttccgtaggtctggaggacatt
gatgacctgatccgtgatctggatgaggcgttgcgctag
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