Pollicipes pollicipes (gooseneck barnacle): 119099660
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Entry
119099660 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119099660
09122 Translation
03013 Nucleocytoplasmic transport
119099660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119099660
03041 Spliceosome [BR:
ppoi03041
]
119099660
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119099660
Spliceosome [BR:
ppoi03041
]
Complex C
Other components
EJC/TREX
119099660
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119099660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
119099660
NCBI-ProteinID:
XP_037078620
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MTPDQFRGLVKHWERVGRSDFLQYLKNIIPPAEKGLLGSVGSSEDVSLCLYRLILAGTDG
TLKKESVSKTLAEAVALHPDLPAQAVDIFGMLEVEMSANDDPKNKERLYWIIKSVEGAVS
NQLLRERMEVESFPHIGVVKNPKAFNSKFIKLKTKLYYKQRKFNLFREESEGYAKLLVEL
NQEQPASSSPEQMLEIIKSVIGCFNLDPNRVLDLLLSSLEARPERHGFLVGLLRLYMPSA
ATVSEMVGAKYGFCRRQPGQEEAEAVTPRSLHLMTALLLRHGVIQLEHIWPWLLPADSAV
EAEHRRQMAAAAEYQRRTFVVSTKDKEDSPRDAELPPLAPLSQSQKLGLCEAVLSVGDWA
TAQRIMARFPDFCLMVHPDIAAAACRLLAVRLDPIYRRYSGLTAALEPAPQLADVRSEVA
PLLSAIGPYLAADVRLVYKVLRVARTAHRQRLQQPEPDSPETREAFLFYDVLTILEESVL
PCLVLLEANCCLAEEIWTVLNFYPYQHRYRLYGTWKNDSHKPHPQLMRKRADFIKMSKSL
MKRISKENVKPLGRLMGKLTHNAPGYMFEYMLGQIQIYDNLIGPMVDSLKYITNLSYDVL
GYCIIEALANPEKDRTKHDGTSLSLWLTSLANFCGAMFKKYNLDLTGLMQYVANQLKSMK
SLDLLILREVVQKMAGVEAVEDMTEEQLSAMAGGEMLRAEAGFFNQVRNTKKSSQRLKDS
LIDNGLMVPMVLLMAQQRHCVVFKETEGSHLKLVGKLYDQCQDTMVQFGMFLSSALSIDD
YRQRLPAFEKLLSEFHVSPDVAFFLARPMFTHAIQQRYDELRKAEKNHKSLSVEQKRDKY
LAASEQVLAPVVAAVVPVFPAKTWDDISPEFFTSFWSLTLSDLRVPTESYEKEVRRLKQQ
ATQLGDNRDLTESKRKKEQERCQALIDKLHEEEKRQKEHVDRVIARLKKEKDSWFEPRQA
KSAKTETMTQFVQMCLFPRCVFTSMDALYCAEFVHTLHSLKTPNFSTLICYDRLFCNITY
TFTSCTENEASRYGRFLCALLETVMRWHGSREVFERECAFFPGFVTKFRVSNKQNERSDH
VDYENYRHVCFKWFYKITKAIVTCLDSKEYVQIRNALKILIKILPCYPVLSHVANIVEKK
VEAVIQAEKNKRQDLALMATSYAGLLRARKTHLIPEKDFHTVDKSKRETPDNADRREKRD
GRPRERAKDDETRSRSGTPRSDRAGARERKHDSSEERRDKKASKHSTPESETKRESDEIR
VVEDEYFEKPRRPAGSAVRSLPEASDVDREAKRRRVESTVSQLLQSSKGGTQHPGVSRPL
KLGLTRSLQCCQACSRLEFRCAVCDGLVVRFGLDARASWFASHVIVGWFGFGSFLSPKMG
SDGRHILLQRLDKMPEKDEEKKKKRKKSEKGLEEGEIRNKREDKKERKRASLDDRGSPIE
SKRKKDDDKPAKRRSEGDEFREVKDKRRQRREEEVEFYDEPRYAPEYDWERERERPPAKE
KHRGRMDSKRR
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgactccagaccagtttcgagggctggtgaaacattgggaacgtgtgggaaggagtgac
ttcctccagtacctgaagaatatcatcccaccagcagagaagggccttttgggctctgtg
ggatcctcagaagatgtcagtctgtgtctttaccgtctcatcctggctggcacggatggc
accctcaagaaggagagcgtctcaaagacactggcagaggcagtggctcttcatcctgac
ctcccagcccaggctgtcgatatctttggaatgttggaggtggaaatgtcggcaaatgat
gacccgaaaaacaaggagcggttgtactggatcatcaagtctgtggaaggggcggtatcg
aaccagctgctgcgggagcgaatggaggtggagagtttccctcacatcggcgtcgtgaaa
aaccccaaggctttcaactcgaagttcatcaagctgaagacgaagctctactacaagcag
cgcaagttcaaccttttccgtgaggagagcgaggggtacgccaagctgctggtggagctc
aatcaggagcagccagcctcgtcctccccagagcagatgctggagattatcaaatctgtc
attggctgcttcaacctggacccgaaccgagtgctggacctgctgctgtcgtcgctggag
gcgcggccggagcgccacggcttcctcgtgggcctgctgcggctgtacatgccgtcggcg
gcgacggtcagcgagatggtgggcgccaagtacggcttctgccggcgccagcccggccag
gaggaggccgaggcagtcacgccgcgctcgctccacctcatgacggcgctcctgctccga
cacggcgtcatccagctggaacacatctggccctggctgctgccggccgactcggcggtg
gaagcggagcaccggcgccagatggccgccgccgccgagtaccagcggcgcacgttcgtc
gtctccaccaaggacaaggaggacagcccacgtgacgccgagctgccgccgctcgcgccg
ctgtcgcagagccagaagctgggtctgtgcgaggcggtgctctcggtcggcgactgggcg
acggcgcagcgcatcatggcgcggttcccggacttctgtctgatggtacacccggacatc
gcggccgccgcctgccgcctgctcgccgtccggctcgaccccatctacagacggtacagc
ggcctgacggcggcgctggagccggcgccgcagctggcggacgtgcgctccgaggtggcg
ccgctgctctcggccatcgggccctacctggccgccgacgtgcggctcgtgtacaaggtg
ctgcgggtggcgcgcaccgcccaccgccagcggctgcagcagccggagccggactcgccg
gagacgcgtgaagcgttcctcttctacgacgtgctgaccatcctggaggagagtgtgctg
ccctgcctggtgctgctcgaggccaactgctgcctggccgaggagatctggaccgtgctc
aacttctacccgtaccagcacaggtaccggctgtacggcacgtggaagaacgacagtcac
aagccacacccgcagctgatgcggaagagggctgacttcatcaagatgtccaagtcgctg
atgaagcgcatcagcaaggagaacgtcaagccgctgggtcggctcatgggcaagctgacc
cacaacgctcctggctacatgttcgaatacatgctgggccagatccagatctacgacaac
ctgatagggccgatggtggactcgctcaagtacatcaccaacctgtcgtacgacgtgctc
ggctactgcatcatcgaggcgctggccaaccccgagaaggaccgcaccaagcatgacggc
acttcgctgtcgctctggctcacctcgctggccaacttctgcggagccatgttcaaaaag
tacaacctagacctcactgggctcatgcagtacgtcgccaaccagctcaagtctatgaaa
agcctggacctgctgatcctgcgcgaggtggtgcagaagatggccggcgtcgaggccgtc
gaggacatgaccgaggagcagctgtcggccatggccggcggcgagatgctccgggccgag
gcgggcttcttcaaccaggtacgcaacaccaagaagtcgtcgcagcgactgaaggacagc
ttgatcgacaacggcctgatggtgccgatggtgctgctgatggcgcagcagcggcactgc
gtcgtcttcaaggagaccgagggctcccacctcaagctggtcggcaagctgtatgaccag
tgccaggacaccatggtccagttcggcatgttcctgtcgtcggccctgagcatcgacgac
taccggcagcggctgccggccttcgagaagctgctgtcagaattccacgtcagtccggac
gtggcgttcttcctggcgcggcccatgttcacgcacgccatccagcaacggtacgacgaa
ctgcgcaaggccgagaagaaccacaagtcgctgtcggtggagcagaagcgcgacaagtac
ctggcggccagcgagcaggtgctggcgccggtggtggcggccgtggtgcccgtgttcccg
gccaagacttgggacgacatcagtcctgagttcttcacgtcgttctggtcgctgacgctg
agcgacctgcgcgtgccgaccgagagctacgagaaggaggtgcgccggctaaagcagcag
gcaacccagctgggcgacaaccgggacctgacggagagcaagcggaagaaggagcaggaa
cggtgtcaggcgctcatcgacaagctgcacgaggaggagaagcgccagaaggagcacgtc
gaccgtgtgatcgcccgcctgaagaaggagaaggactcgtggttcgagccgcgccaggcc
aagtcggccaagacggagacgatgacgcagttcgtgcagatgtgcctgttcccgcgctgc
gtgttcacctcgatggacgcgctctactgcgccgagttcgtgcacaccctgcacagcctg
aagacgccaaacttctccacgctcatctgctacgacaggctgttctgcaacatcacctac
acgttcacgtcgtgcacggagaacgaggcgtcgcgctacggccgcttcctgtgcgccctg
ctggagacggtgatgcgctggcacggcagccgcgaggtgtttgagcgcgagtgcgccttc
ttccccggcttcgtcaccaagttccgcgtctccaacaagcagaacgagcgcagcgaccac
gtcgactacgagaactaccgccacgtctgcttcaagtggttctataaaatcaccaaggcg
atcgtcacctgcctggacagcaaggagtacgtgcagattcgtaacgcgctcaagatcctc
atcaagatcctgccctgctacccggtgcttagtcacgtggccaacatcgtcgagaagaag
gtggaggcggtgattcaggcggagaagaacaagcggcaggacctggcgctcatggccacc
agctacgccggcctgctgcgcgcccgcaaaacacacctaatccccgagaaggacttccac
acagtcgacaagagcaagcgcgagacgccggataacgccgaccggcgggagaagcgggac
ggccggccgcgcgagcgcgccaaggacgacgagacccggagtcgctccggcacgccgcgc
tccgaccgcgccggcgcccgggaacgcaagcacgacagcagtgaggagcggcgcgacaag
aaggcctccaaacacagcacgccagagtcggaaaccaaaagggagtccgatgagatccgc
gtcgtcgaggacgagtacttcgagaagccgcgccggccggccggctcggccgtgcgcagc
ctgcccgaggcctctgacgtcgacagagaggccaagcgccgccgagtggagagtactgta
tcacagctgttgcagtccagtaaaggaggaacgcagcaccctggcgtgtccagaccgcta
aagctcgggctgactcgctctttgcaatgctgccaagcttgttcacggttagagttccgt
tgtgccgtgtgtgacggtctggttgtccgttttggcctggacgcgcgtgcttcttggttt
gccagtcatgttattgtcggttggtttgggtttggaagctttctttcgccaaaaatgggg
tcagatggccggcatatcttattacagaggttggacaaaatgccagagaaggacgaggag
aagaaaaagaaacggaagaagtcggagaagggcctggaggagggggaaatcagaaacaaa
cgagaagacaagaaggaaaggaaaagggcgtcgctggacgacaggggatcgccgatcgag
tccaagcgaaagaaggatgacgacaagcccgcgaagcgacgctccgagggcgatgagttc
cgcgaggtcaaggacaaacggaggcagaggcgggaggaggaggtggagttctacgacgag
ccacgctacgcgcccgagtacgactgggagcgggagcgggagcggccgcctgccaaggag
aaacatagaggccgcatggacagcaaacgacgatga
DBGET
integrated database retrieval system
